Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEF0
Confidence97.72%DateThu Jan 5 11:23:10 GMT 2012
Rank145Aligned Residues112
% Identity17%Templatec2zj2A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative ski2-type helicase; PDBTitle: archaeal dna helicase hjm apo state in form 1
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8990.........100.........110...... ...120.........130... ......140.........150..
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Query Sequence  RQYVEEFDGNIASFIFSGKPGTGKNHLA. AAICNELLLRGKSVLII. TVADIMSAMKDTFRNSGTS. . . . . . . . . . . . . .
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Template Sequence  AEALKSGILEGKNALISIPTASGKTLIAEIAMVHRILTQGGKAVYIVPLKALAEEKFQEFQDWEKIGLRVAMATGDYDSK
Template Known Secondary structure  TTTGGGT
S
GGGT
SSSTTSTGGGGGGT


S

S

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   2930.........40.........50.........60.........70.........80.........90.........100........
 
   153......160.........170.........180.........190.........200..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . EEQLLNDLSNVDLLVIDEIGVQTESKYEKVIINQIVDRRSSSKRPTGMLT
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Template Sequence  DEWLGKYDIIIATAEKFDSLLRHGSSWIKDVKILVADEIHLIGSRDR. . GATLEVILAHMLGKAQIIGLS
Template Known Secondary structure 
GGGGG
ST
GGGGGTGGGGG
TTT..BTTB
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   109110.........120.........130.........140.........150..... ....160.........170......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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