Job Description P0AEF0 Confidence 97.95% Date Thu Jan 5 11:23:10 GMT 2012 Rank 120 Aligned Residues 107 % Identity 14% Template c2z83A_ PDB info PDB header:viral protein Chain: A: PDB Molecule:helicase/nucleoside triphosphatase; PDBTitle: crystal structure of catalytic domain of japanese2 encephalitis virus ns3 helicase/nucleoside triphosphatase3 at a resolution 1.8 Resolution 1.80 Å

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		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.													150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.																				.																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.																				.																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	F	D	G	N	I	A	S	F	I	F	S	G	K	P	G	T	G	K	N	H	.	L	A	A	A	I	C	N	E	L	L	L	R	G	K	S	V	L	I	I	.	T	V	A	D	I	M	S	A	M	K	D	T	F	R	N	S	.	.	.	.	.	.	.	.	.	.	.	.	G	T	S	E	E	Q	L	L	N	D
Query Conservation																							.																				.																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.																				.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	M	L	R	K	R	Q	M	T	V	L	D	L	H	P	G	S	G	K	T	R	K	I	L	P	Q	I	I	K	D	A	I	Q	Q	R	L	R	T	A	V	L	A	P	T	R	V	V	A	A	E	M	A	E	A	L	R	G	L	P	V	R	Y	Q	T	G	N	E	I	V	D	V	M	C	H	A	T	L	T	H	R
Template Known Secondary structure		G	G	G	S	T	T									T	T	S		T	T	T	T												T	T									S											T	T	T	S										S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
							160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	L	S	N	V	D	L	L	V	I	D	E	I	G	V	Q	T	E	S	K	Y	E	K	V	I	I	N	Q	I	V	D	R	R	S	S	S	K	R	P	T	G	M	L	T
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.															.	.
Template Conservation																					.	.
Template Sequence		L	M	S	P	N	V	P	N	Y	N	L	F	V	M	D	E	A	H	F	.	.	T	D	P	A	S	I	A	A	R	G	Y	I	A	T	K	V	E	L	G	E	A	A	A	I	F	M	T
Template Known Secondary structure				S							S					S	S	T	T		.	.		S																T	T	S
Template Predicted Secondary structure																					.	.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.			.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions