Job Description P0AEF0 Confidence 99.77% Date Thu Jan 5 11:23:10 GMT 2012 Rank 7 Aligned Residues 174 % Identity 19% Template c2z4rB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:chromosomal replication initiator protein dnaa; PDBTitle: crystal structure of domain iii from the thermotoga2 maritima replication initiation protein dnaa Resolution 3.05 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		R	P	L	H	Q	N	C	S	F	E	N	Y	R	V	E	C	E	G	Q	M	N	A	L	S	K	A	R	Q	Y	V	E	E	F	D	G	N	I	A	S	F	I	F	S	G	K	P	G	T	G	K	N	H	L	A	A	A	I	C	N	E	L	L	L	R	.	.	G	K	S	V	L	I	I	T	V	A	D	I	M	S
Query Conservation																																																																		.	.
Alig confidence																	.																		.																															.	.
Template Conservation																	.																		.
Template Sequence		T	P	L	N	P	D	Y	T	F	E	N	F	V	V	G	.	P	G	N	S	F	A	Y	H	A	A	L	E	V	A	K	H	P	.	G	R	Y	N	P	L	F	I	Y	G	G	V	G	L	G	K	T	H	L	L	Q	S	I	G	N	Y	V	V	Q	N	E	P	D	L	R	V	M	Y	I	T	S	E	K	F	L	N
Template Known Secondary structure						S	S		S	G	G	G					.	T	T	T													S	T	.	T	T	S								S	S	S	S	S																S	S	S	S
Template Predicted Secondary structure																	.																		.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	K	D	T	F	R	N	S	G	T	S	E	E	Q	L	L	N	D	L	S	N	V	D	L	L	V	I	D	E	I	G	V	Q	T	E	S	K	Y	E	K	V	I	I	N	Q	I	V	D	R	R	S	S	S	K	R	P	T	G	M	L	T	N	S	N	M	E	E	M	T	K	L	L	G	E	R	V	M	D	R
Query Conservation
Alig confidence																	.																																																								.
Template Conservation																	.																																																								.
Template Sequence		D	L	V	D	S	M	K	E	G	K	L	N	E	F	R	.	E	K	Y	R	K	K	V	D	I	L	L	I	D	D	V	Q	F	L	I	G	K	T	G	V	Q	T	E	L	F	H	T	F	N	E	L	H	D	S	G	K	Q	I	V	I	C	S	D	R	E	P	Q	K	L	S	E	.	F	Q	D	R	L	V	S	R
Template Known Secondary structure									T	S							.				T	T	T		S							G	G	G	G	T	T																	T	T	T								S	S		T	T	T		S	S	.
Template Predicted Secondary structure																	.																																																								.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	L	G	N	S	L	W	V	I	F	N	W	D	S	Y	R	S	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	Q	M	G	L	V	A	K	L	E	P	P	D	E	E	T	R	K	S	I
Template Known Secondary structure				S	S
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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