Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEF0
Confidence96.95%DateThu Jan 5 11:23:10 GMT 2012
Rank299Aligned Residues85
% Identity19%Templatec2vl7A_
PDB info PDB header:unknown functionChain: A: PDB Molecule:xpd; PDBTitle: structure of s. tokodaii xpd4
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7980.........90.........100.........110.........120.........130.........140.........150........
Predicted Secondary structure 














Query SS confidence 















































































Query Sequence  EGQMNALSKARQYVEEFDGNIASFIFSGKPGTGKNHLAAAICNELLLRGKSVLIITVADIMSAMKDTFRNSGTSEEQLLN
Query Conservation                         
 
 
  
 





 

   
   
  
       
                    
Alig confidence 












....



























..
































Template Conservation    
      
   ....
      

 



 


   
  
   ..       
 
  
  
   
   

        
Template Sequence  QWQAEKLGEAINA. . . . LKHGKTLLLNAKPGLGKTVFVEVLGMQL. . KKKVLIFTRTHSQLDSIYKNAKLLGLKTGFLRA
Template Known Secondary structure 
....TT


TTS
..T
S
GGGT



T
Template Predicted Secondary structure  ....









..












Template SS confidence 















































































   10.........20.. .......30.........40.........50 .........60.........70.........80...
 
   159160.........
Predicted Secondary structure 


Query SS confidence 










Query Sequence  DLSNVDLLVID
Query Conservation       
 



Alig confidence 










Template Conservation      




  
Template Sequence  NLKDKDVIAMT
Template Known Secondary structure  TGGG
S
Template Predicted Secondary structure 





Template SS confidence 










   141........150.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions