Job Description P0AEF0 Confidence 97.81% Date Thu Jan 5 11:23:10 GMT 2012 Rank 131 Aligned Residues 125 % Identity 22% Template c2va8A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:ski2-type helicase; PDBTitle: dna repair helicase hel308 Resolution 2.30 Å

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																														.																	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.																	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Q	Y	V	E	E	F	D	G	N	I	A	S	F	I	F	S	G	K	P	G	T	G	K	N	H	L	A	.	A	A	I	C	N	E	L	L	L	R	G	K	S	V	L	I	.	I	T	V	A	D	I	M	S	A	M	K	D	T	F	R	N	S	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																														.																	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.																	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	E	A	V	K	K	G	L	L	E	G	N	R	L	L	L	T	S	P	T	G	S	G	K	T	L	I	A	E	M	G	I	I	S	F	L	L	K	N	G	G	K	A	I	Y	V	T	P	L	R	A	L	T	N	E	K	Y	L	T	F	K	D	W	E	L	I	G	F	K	V	A	M	T	S	G	D	Y	D	T	D
Template Known Secondary structure							T	T	T	T	T	T									T	T	S																	S		S							S													G	G	G	G	G	G	T								S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
														152	.	.	.	.	.	.	.								160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	S	E	E	Q	L	L	N	D	.	.	.	.	.	.	.	L	S	N	V	D	L	L	V	I	D	E	I	G	V	Q	T	E	S	K	Y	E	K	V	I	I	N	Q	I	V	D	R	R	S	S	S	K	R	P	T	G	M	L	T	N	S	N	M	E	E	M	T	K	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.															.
Template Conservation																																											.
Template Sequence		D	A	W	L	K	N	Y	D	I	I	I	T	T	Y	E	K	L	D	S	L	W	R	H	R	P	E	W	L	N	E	V	N	Y	F	V	L	D	E	L	H	Y	.	L	N	D	P	E	R	G	P	V	V	E	S	V	T	I	R	A	K	R	R	N	L	L	A	L	S	A	T	I	S	N	Y	K	Q	I	A	K	W
Template Known Secondary structure			G	G	G	G	G		S																		G	G	G	G	G								S	G	G	G	.	G	G		T	T	T													T	S							S			T	T
Template Predicted Secondary structure																																											.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		213	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		188	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions