Job Description P0AEF0 Confidence 98.27% Date Thu Jan 5 11:23:10 GMT 2012 Rank 85 Aligned Residues 184 % Identity 13% Template c2og2A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:putative signal recognition particle receptor; PDBTitle: crystal structure of chloroplast ftsy from arabidopsis2 thaliana Resolution 2.00 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.						.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.											.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	M	Q	R	T	F	N	R	S	G	I	R	P	L	H	Q	N	C	S	F	E	N	Y	R	V	E	.	.	.	.	.	C	E	G	Q	M	N	A	L	S	K	A	R	Q	Y	V	E	E	F	.	.	.	.	.	.	.	.	.	.	D	G	N	I	A	S	F	I	F	S	G	K	P	G	T	G	K	N	H	L
Query Conservation																													.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	E	L	E	E	A	L	L	V	S	D	F	G	P	K	I	T	V	R	I	V	E	R	L	R	E	D	I	M	S	G	K	L	K	S	G	S	E	I	K	D	A	L	K	E	S	V	L	E	M	L	A	K	K	T	E	L	Q	L	G	F	R	K	P	A	V	I	M	I	V	G	V	N	G	G	G	K	T	T	S
Template Known Secondary structure											T	T																			T	T	S			S																					S					S	S	S	S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.																	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	A	I	C	N	E	L	L	L	R	G	K	S	V	L	I	I	T	V	A	.	.	.	.	D	I	M	S	A	M	K	D	T	F	R	N	S	G	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	Q	L	L	N	D	L	S	N	V	D	L	L	V	I	D	E	I	G	V	Q	T
Query Conservation																							.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	K	L	A	H	R	L	K	N	E	G	T	K	V	L	M	A	A	G	D	T	F	R	A	A	A	S	D	Q	L	E	I	W	A	E	R	T	G	C	E	I	V	V	A	E	G	D	K	A	K	A	A	T	V	L	S	K	A	V	K	R	G	K	E	E	G	Y	D	V	V	L	C	D	T	S	G	R	L	H
Template Known Secondary structure												T	T											S																T							S	S	S	S																	T	T		S										S	S
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.							.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.
Query Sequence		E	S	K	Y	E	K	V	I	I	N	Q	I	V	D	R	R	S	.	.	.	.	.	.	S	S	K	R	P	T	G	M	L	T	N	S	N	M	E	E	M	T	K	L	L	G	E	R	V	M	D	R	M	R	L	G	N	S	L	W	V	I	F	N	W	D	S	Y
Query Conservation																			.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.																				.	.
Template Conservation																																												.	.
Template Sequence		T	N	Y	S	L	M	E	E	L	I	A	C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D	G	N	T	G	L	N	M	L	P	Q	.	.	A	R	E	F	N	E	V	V	G	I	T	G	L	I	L	T	K	L	D	G	S	A	R
Template Known Secondary structure																					S	T	T			S								G	G	G	G	G	G	G				.	.								T									S		T	T		S
Template Predicted Secondary structure																																												.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.			.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions