Job Description P0AEF0 Confidence 97.25% Date Thu Jan 5 11:23:10 GMT 2012 Rank 227 Aligned Residues 103 % Identity 21% Template c2o8dB_ PDB info PDB header:dna binding protein/dna Chain: B: PDB Molecule:dna mismatch repair protein msh6; PDBTitle: human mutsalpha (msh2/msh6) bound to adp and a g du mispair Resolution 3.00 Å

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		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130													.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.								.	.	.	.	.	.	.	.	.	.	.	.						.
Query SS confidence																																.	.								.	.	.	.	.	.	.	.	.	.	.	.						.
Query Sequence		E	F	D	G	N	I	A	S	F	I	F	S	G	K	P	G	T	G	K	N	H	L	A	A	A	I	C	N	E	L	.	.	L	L	R	G	K	S	V	.	.	.	.	.	.	.	.	.	.	.	.	L	I	I	T	V	.	A	D	I	M	S	A	M	K	D	T	F	R	N	S	G	T	S	E	E	Q	L	L	N
Query Conservation																																.	.								.	.	.	.	.	.	.	.	.	.	.	.						.
Alig confidence																																.	.								.	.	.	.	.	.	.	.	.	.	.	.						.											.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.
Template Sequence		E	Q	E	N	K	A	Y	C	V	L	V	T	G	P	N	M	G	G	K	S	T	L	M	R	Q	A	G	L	L	A	V	M	A	Q	M	G	C	Y	V	P	A	E	V	C	R	L	T	P	I	D	R	V	F	T	R	L	G	S	T	F	F	V	E	L	S	E	T	.	.	.	.	.	.	.	.	A	S	I	L	M
Template Known Secondary structure		T	T										B			T	T	S	S																T	T	T			B	S	S	S								S	B																	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.
Template SS confidence
		1121	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.									.	.	1190	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		D	L	S	N	V	D	L	L	V	I	D	E	I	G	V	Q	T	E	S	K	Y	E	K	V	I	I	N	Q	I	V	D	R	R	S	S	S	.	K	R	P	T	G	M	L	T	N	S
Query Conservation																																						.
Alig confidence																																						.
Template Conservation
Template Sequence		H	A	T	A	H	S	L	V	L	V	D	E	L	G	R	G	T	A	T	F	D	G	T	A	I	A	N	A	V	V	K	E	L	A	E	T	I	K	C	R	T	L	F	S	T	H	Y
Template Known Secondary structure					T	T								S		T	T	S																			T	S
Template Predicted Secondary structure
Template SS confidence
		1203	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions