|   |
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
Predicted Secondary structure |   |
|  |  |  |
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | F | E | N | Y | R | V | E | C | E | G | Q | M | N | A | L | S | K | A | R | Q | Y | V | E | E | F | . |
. |
. |
. |
. |
. |
. |
D | G | N | I | A | S | F | I | F | S | G | K | P | G | T | G | K | N | H | L | A | A | A | I | C | N | E | L | L | L | R | G | K | S | V | L | I | I | T | V | A | D | I | M | S | A | M |
Query Conservation |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |
|
|
|
|
|
|   |
|
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
  |   |   |
|
| . |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|   |   |   | . | . | . |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   | . |
Template Sequence |   |
T | F | K | D | V | . |
A | G | A | E | E | A | K | E | E | L | K | E | I | V | E | F | L | K | N | P | S | R | F | H | E | M | G | A | R | I | P | K | G | V | L | L | V | G | P | P | G | V | G | K | T | H | L | A | R | A | V | A | G | E | A | . |
. |
. |
R | V | P | F | I | T | A | S | G | S | D | F | V | E | M | . |
Template Known Secondary structure |   |
| T | T | S | S | . |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G | T | T | T | T | S |
|
|
|
| S |  |  |  |  |  |
| S | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  | T | . | . | . | T |
|
|  |  |  |  |  | G | G | G | G | T | S | S | . |
Template Predicted Secondary structure |   |
|  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
154 | . | . | . | . | |
. | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | |
|
|
. | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | |
  |
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 170 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | |
|
|
|
. | . | . | . | . | . | . | 200 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . |
|  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |
|
|
|
|  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | D | T | F | R | N | S | G | T | S | E | E | Q | L | L | N | D | L | S | N | V | D | . |
. |
. |
. |
. |
L | L | V | I | D | E | I | G | V | Q | T | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
S | K | Y | E | K | V | I | I | N | Q | I | V | D | R | R | S | . |
. |
. |
. |
S | S | K | R | P | T | G | M | L | T | N | S |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| . | . | . | . | . |   |
|
|
|
|
|   |
|   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   | . | . | . | . |   |   |   |   |   |   |
|
|
|
|
|   |
Alig confidence |   |
. | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
F | V | G | V | G | A | A | R | V | R | D | L | F | E | T | A | K | R | H | A | P | C | I | V | F | I | D | E | I | D | A | V | G | R | K | R | G | S | G | V | G | G | G | N | D | E | R | E | Q | T | L | N | Q | L | L | V | E | M | D | G | F | E | K | D | T | A | I | V | V | M | A | A | T | N | R |
Template Known Secondary structure |   |
. | . | . | . | . |
| T | T |  |  |  |  |  |  |  |  |  |  | T | T | S | T | T | S | S | S |
|  |  |  |  |  |
| G | G | G | T |
|
|
| S | S | S | S | T | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
|
| S | S |
|
|
|  |  |  |  |
|
| S |
|
Template Predicted Secondary structure |   |
. | . | . | . | . |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
229 | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . |
  |
  |   |
205 | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | M | E | E | M | T | K | L | L | G | E | R | V | M | D | R | M | R | L | G | N | S | L | W | V | I | F | N | W | D | S | Y | R | S | R | V |
Query Conservation |   |
  |   |   |
|
|   |   |   |   |   |   |
|
|   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |   |   |
Alig confidence |   |
. | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . |   |   |   |
|
|   |
|
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
Template Sequence |   |
. |
. |
. |
. |
. |
P | D | I | L | D | P | A | L | L | R | P | G | R | F | D | R | Q | I | A | I | D | A | P | D | V | K | G | R | E | Q | I |
Template Known Secondary structure |   |
. | . | . | . | . | G | G | G | S |
| T | T | T | S | S | T | T | S | S |
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
304 | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . |
  |