Job Description P0AEF0 Confidence 98.31% Date Thu Jan 5 11:23:10 GMT 2012 Rank 82 Aligned Residues 130 % Identity 15% Template c1xxhB_ PDB info PDB header:transferase Chain: B: PDB Molecule:dna polymerase iii subunit gamma; PDBTitle: atpgs bound e. coli clamp loader complex Resolution 3.45 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	H	Q	N	C	S	F	E	N	Y	R	V	E	C	E	G	Q	M	N	A	L	S	K	A	R	Q	Y	V	E	E	F	D	G	N	I	A	S	F	I	F	S	G	K	P	G	T	G	K	N	H	L	A	A	A	I	C	N	E	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.
Template Sequence		R	K	W	R	P	Q	T	F	A	D	V	V	G	Q	E	H	V	L	T	A	L	A	N	G	L	S	L	.	.	.	.	.	G	R	I	H	H	A	Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	R	L	L	A	K	G	L	N	C	E	T	G	I	T	A	T	P	C	G	V	C	D	N	C	R	E	I
Template Known Secondary structure				T			S	S	G	G	G			S														T	.	.	.	.	.	T				S							S	T	T	S	S													S		T	T		S		S	S			S		S
Template Predicted Secondary structure																													.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.						.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
				125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure		.	.																	.	.
Query SS confidence		.	.																	.	.
Query Sequence		.	.	L	R	G	K	S	V	L	I	I	T	V	A	D	I	M	S	.	.	A	M	K	D	T	F	R	N	S	G	T	S	E	E	Q	L	L	N	D	L	S	N	V	D	L	L	V	I	D	E	I	G	V	Q	T	E	S	K	Y	E	K	V	I	I	N	Q	I	V	D	R	R	S	S	S	K	R	P	T	G	M
Query Conservation		.	.																	.	.
Alig confidence		.	.																	.	.																.	.	.	.	.														.	.
Template Conservation																																					.	.	.	.	.														.	.
Template Sequence		E	Q	G	R	F	V	D	L	I	E	I	D	A	A	S	R	T	K	V	E	D	T	R	D	L	L	D	N	V	Q	Y	A	P	A	R	.	.	.	.	.	G	R	F	K	V	Y	L	I	D	E	V	H	M	.	.	L	S	R	H	S	F	N	A	L	L	K	T	L	E	E	P	P	E	H	V	K	F	L	L	A
Template Known Secondary structure				T			T	T						S	S		S	T	T	T	T								T				S		S	S	.	.	.	.	.	S	S								T	G	G	G	.	.															S			T	T
Template Predicted Secondary structure																																					.	.	.	.	.														.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.						.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		201	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	N	S	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	T	D	P	Q
Template Known Secondary structure			S		T	T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions