Job Description P0AEF0 Confidence 97.42% Date Thu Jan 5 11:23:10 GMT 2012 Rank 194 Aligned Residues 115 % Identity 15% Template c1szpC_ PDB info PDB header:dna binding protein Chain: C: PDB Molecule:dna repair protein rad51; PDBTitle: a crystal structure of the rad51 filament Resolution 3.25 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.							.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																															.	.	.	.	.	.												.	.																									.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.												.	.																									.	.	.	.	.	.	.	.
Query Sequence		N	I	A	S	F	I	F	S	G	K	P	G	T	G	K	N	H	L	A	A	A	I	C	N	E	L	L	L	R	.	.	.	.	.	.	G	K	S	V	L	I	I	T	V	A	D	.	.	I	M	S	A	M	K	D	T	F	R	N	S	G	T	S	E	E	Q	L	L	N	D	L	S	.	.	.	.	.	.	.	.
Query Conservation																															.	.	.	.	.	.												.	.																									.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.												.	.																									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	G	S	I	T	E	L	F	G	E	F	R	T	G	K	S	Q	L	C	H	T	L	A	V	T	C	Q	I	P	L	D	I	G	G	G	E	G	K	C	L	Y	I	D	T	E	G	T	F	R	P	V	R	L	V	S	I	A	Q	R	F	G	L	D	P	D	D	A	L	N	N	V	A	Y	A	R	A	Y	N	A	D
Template Known Secondary structure		S	S	S							S	T	T	S	S												T	T	S		T	T	T	T			S	S							S	S	S				G	G	G	G							T								G	G	G								S	T	T
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
																		162	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.					.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																						.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																						.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	D	L	L	V	I	D	E	I	G	V	.	Q	T	E	S	K	Y	E	K	V	I	I	N	Q	I	V	D	R	R	S	S	S	.	.	.	.	K	R	P	T	G	M	L	T	N	S	N	M	E	E	M	T	K	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																						.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																						.	.	.	.
Template Conservation
Template Sequence		H	Q	L	R	L	L	D	A	A	A	Q	M	M	S	E	S	R	F	S	L	I	V	V	D	S	V	M	A	L	Y	R	E	L	S	A	R	Q	M	H	L	A	K	F	M	R	A	L	Q	R	L	A	D	Q	F	G	V	A	V	V	V	T	N	Q	V	G	G	N	I	M	A	H	S
Template Known Secondary structure										T							S										T	T	G	G	G			T
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions