Job Description P0AEF0 Confidence 98.42% Date Thu Jan 5 11:23:10 GMT 2012 Rank 72 Aligned Residues 110 % Identity 16% Template c1sxjE_ PDB info
PDB header: replicationChain: E: PDB Molecule: activator 1 40 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna)
Resolution 2.85 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
86 . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140 . . . . . . . . . 150 . . . .
Predicted Secondary structure
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Query SS confidence
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Query Sequence
S K A R Q Y V E E F D G N I .
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A S F I F S G K P G T G K N H L A A A I C N E L L L R G .
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K S V L I I T V A D I M S A M K D T F R N S G T S E E
Query Conservation
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Alig confidence
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Template Conservation
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Template Sequence
E E L T N F L K S L S D Q P R D L P H L L L Y G P N G T G K K T R C M A L L E S I F G P G V Y R N V V S S P Y H L E I T P S N D R I V I Q E L L K E V A Q M E .
Template Known Secondary structure
T T T T T T S T T S S T S T T S S T T T T .
Template Predicted Secondary structure
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Template SS confidence
20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . .
155 . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . .
Predicted Secondary structure
Query SS confidence
Query Sequence
Q L L N D L S N V D L L V I D E I G V Q T E S K Y E K V I I N Q I V D R R S S S K R P T G M L T N S N
Query Conservation
Alig confidence
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Template Conservation
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Template Sequence
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Q R Y K C V I I N E A N S .
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L T K D A Q A A L R R T M E K Y S K .
N I R L I M V C D S M
Template Known Secondary structure
. . . . . . T T S . . S S T T . T S S
Template Predicted Secondary structure
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Template SS confidence
121 . . . . . . . . 130 . . . . . . . . . 140 . . . . . . . . . 150 . . . . . . . . . 160 . .
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre serverKelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]
