Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEF0
Confidence96.42%DateThu Jan 5 11:23:10 GMT 2012
Rank394Aligned Residues48
% Identity15%Templatec1cz7C_
PDB info PDB header:contractile proteinChain: C: PDB Molecule:microtubule motor protein ncd; PDBTitle: the crystal structure of a minus-end directed microtubule2 motor protein ncd reveals variable dimer conformations
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6970.........80.........90.........100 .........110......
Predicted Secondary structure 









.





Query SS confidence 































.















Query Sequence  CSFENYRVECEGQMNALSKARQYVEEFDGNIA. SFIFSGKPGTGKNHLA
Query Conservation   

 
                           . 
 
 
  
 





Alig confidence 































.















Template Conservation 
 

 

    

  

  
  

   
 
 
  
 









 

Template Sequence  FSFDQVFHPLSSQSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTM
Template Known Secondary structure 
S

TT

TT

STTSS
Template Predicted Secondary structure 


















Template SS confidence 
















































   396...400.........410.........420.........430.........440....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions