 |
Job Description | P38036 | Confidence | 87.73% | Date | Thu Jan 5 11:57:49 GMT 2012 |
Rank | 440 | Aligned Residues | 67 |
% Identity | 18% | Template | d1ynba1 |
SCOP info | HD-domain/PDEase-like
| HD-domain/PDEase-like
| HD domain
|
Resolution | 1.76 |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | E | P | F | K | Y | I | C | H | Y | W | G | K | S | S | K | S | L | T | K | G | . |
. |
. |
. |
. |
. |
N | D | I | H | L | L | I | Y | H | C | L | D | V | A | A | V | A | D | C | W | W | D | Q | S | V | V | L | Q | N | T | F | C | R | N | E | M | L | S | K | Q | R | V | K | A | W | L | L | F | F | I | A | L | H |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |
|   |   |
|
|   |
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|
|   |   |   |   |   |
|
|   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |
| . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   | . |   |
|
|   |
|
Template Sequence |   |
M | D | D | V | V | K | F | I | H | E | V | G | S | L | K | L | T | P | R | S | G | W | L | K | L | G | I | R | L | P | E | S | V | A | E | H | N | F | R | A | A | I | I | A | F | I | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | L | K | S | G | E | S | V | E | K | A | C | K | A | A | T | . |
A | A | L | F | H |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  | G | G | G | G | S | B |
| G | G | G | G | G | G | T |
| S | S |
|
| B |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  | . |  |  |  |  | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  | . |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | |
70 | . | . | . | . |
  |
  |   |
75 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
D | I | G | K | F |
Query Conservation |   |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
Template Sequence |   |
D | L | H | E | A |
Template Known Secondary structure |   |
T | T | T |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
  |   |
75 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|