Return to main results Retrieve Phyre Job Id

Job DescriptionP38036
Confidence99.74%DateThu Jan 5 11:57:49 GMT 2012
Rank87Aligned Residues199
% Identity14%Templated1veca_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution2.01

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   273......280.........290.. .......300.........310.........320.........330..... ....340.........350
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Query Sequence  LVSNKRCYEGVHALLDNGYQ. PRQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQ. IADSVIFALPTQATA
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Template Sequence  FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELA
Template Known Secondary structure  GGGS


TTT

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SSSTT

TTS
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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   351........360.........370.........380.........390.........400.........410.........420.........430
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Query Sequence  NAMLTRMEASASHLFSSPNLILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLIS
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Template Sequence  LQVSQICIQVSKHMGGAKVMATTGGTNLRDDI. . . . . . . . . . . . . . . . . . . . . . . . . . . . MRLDDTVHVVIATPGRILDL
Template Known Secondary structure  TTTSSS


SSS
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   167..170.........180.........190........ .200.........210........
 
   431........440.........450....... ..460.........470.........480.........490.........500......
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Query Sequence  VLPVKHRFIRGLGIGRSVLIVDEVHAY. DTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYGLHTDPVE
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Template Sequence  IKKGVAKV. . . . . DHVQMIVLDEADKLLSQDFVQIMEDIILTLPK. NRQILLYSATFPLSVQK. FMNSHLEKPYEIN
Template Known Secondary structure  TT
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TTSTTTS
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   219220...... ...230.........240.........250........ .260.........270..... ....280........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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