 |
Job Description | P38036 | Confidence | 99.46% | Date | Thu Jan 5 11:57:49 GMT 2012 |
Rank | 120 | Aligned Residues | 132 |
% Identity | 17% | Template | d1tf5a4 |
SCOP info | P-loop containing nucleoside triphosphate hydrolases
| P-loop containing nucleoside triphosphate hydrolases
| Tandem AAA-ATPase domain
|
Resolution | 2.18 |
|
 |
  |   |
535 | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | P | R | F | S | I | Q | P | E | P | I | C | L | A | D | M | L | P | D | L | T | M | L | E | R | M | I | A | A | A | N | A | G | A | Q | V | C | L | I | C | N | L | V | D | V | A | Q | V | C | Y | Q | R | L | K | E | L | N | N | T | Q | V | D | I | D | L | F | H | A | R | F | T | L | N | D | R | R | E | K | E | N |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|
|
|   |
|
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |   |   |   |
|
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   | . | . | . |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |
Template Sequence |   |
P | V | V | R | D | D | R | P | D | L | I | Y | R | T | M | E | G | K | F | K | A | V | A | E | D | V | A | Q | R | Y | M | T | G | Q | P | V | L | V | G | T | V | A | V | E | T | S | E | L | I | S | K | L | L | K | N | K | . |
. |
. |
G | I | P | H | Q | V | L | N | A | K | N | H | E | R | E | A | Q | I | I | E | E |
Template Known Secondary structure |   |
|
|
|
|  |  |
|
|
|  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | T |
|
|
|  |  |  |
| S | S |
|  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
397 | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | |
|
|
. | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . |
  |
  |   |
615 | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | 650 | . | . | . | . | . | |
|
. | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |
|
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | V | I | S | N | F | G | K | N | G | K | R | N | V | G | R | I | L | V | A | T | Q | V | V | E | Q | S | L | D | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
D | F | D | W | L | I | T | Q | H | C | P | . |
. |
A | D | L | L | F | Q | R | L | G | R | L | H | R | H | H | R | K | Y | R | P | A | G | F | E |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|
| . | . | . | . | . | . | . | . | . |
|   |
|   |
|
|   |   |   |
|
| . | . |   |
|
|
|
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|
|
|   |
|   |   |   |   |   |
|
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|   |
|   |   |   |   |   |
|   |
|
|   |
|
|   |
|
|   |
|   |   |
|   |   |   |   |   |   |
Template Sequence |   |
A | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Q | K | G | A | V | T | I | A | T | N | M | A | G | R | G | T | D | I | K | L | G | E | G | V | K | E | L | G | G | L | A | V | V | G | T | E | R | H | E | S | R | R | I | D | N | Q | L | R | G | R | S | G | R | Q | G | D | P | G | I | T | Q | F | Y | L |
Template Known Secondary structure |   |
T | T | . | . | . | . | . | . | . | . | . | . | S | T | T |
|  |  |  |  |  | T | T | S | S | T | T |
|
|
|
|
|
| T | T | S | G | G | G | T | S |  |  |  |  |  | S | S |
|
| S | S |  |  |  |  |  |  |  |  | T | T | S | S | G | G | G |
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
474 | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|