Return to main results Retrieve Phyre Job Id

Job DescriptionP38036
Confidence99.57%DateThu Jan 5 11:57:49 GMT 2012
Rank112Aligned Residues181
% Identity13%Templated1tf5a3
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution2.18

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   290.........300.........310.........320.........330.........340.........350.........360.........
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  GYQPRQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQIADSVIFALPTQATANAMLTRMEASASHLFSSPN
Query Conservation         
             

 







 


  
  
       


  


 

  
   
             
Alig confidence 


















..
























..



























..

Template Conservation         
  
   
  
 ..

   

 



            
..    

 
   

             
 ..  
Template Sequence  GMFPFKVQLMGGVALHDGN. . IAEMKTGEGKTLTSTLPVYLNALTG. . KGVHVVTVNEYLASRDAEQMGKIFEFLG. . LT
Template Known Secondary structure  S



TTS..

TTS
TTS..S
SSTT..

Template Predicted Secondary structure 









..





..




..
Template SS confidence 















































































   78.80.........90...... ...100.........110.........120. ........130.........140......... 150.
 
   370.........380.........390.........400.........410.........420.........430.........440 .......
Predicted Secondary structure 






















..



Query SS confidence 






































































. .






Query Sequence  LILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIR. . GLGIGRS
Query Conservation 
 
 
                                          
 
 


 



           
..   
   
Alig confidence 







.............................

































..






Template Conservation 
       .............................           


  
   
  
 
 
 
             
Template Sequence  VGLNLNSM. . . . . . . . . . . . . . . . . . . . . . . . . . . . . SKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQRPLH
Template Known Secondary structure 

TTS.............................
SSTT
SSGGG






Template Predicted Secondary structure 




.............................
















Template SS confidence 















































































   152....... 160.........170.........180.........190.........200..
 
   448.450....... ..460.........470.........480.........490.........500........
Predicted Secondary structure 






.............


















Query SS confidence 









. . . . . . . . . . . . .


















































Query Sequence  VLIVDEVHAY. . . . . . . . . . . . . DTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYGLHTDPVENN
Query Conservation 







  .............       
   
  
       







      
              
Alig confidence 









.............







..






















.
















Template Conservation    





 

 


  
            
..
 
  
     
 




     . 
   
  
 
  


 
Template Sequence  FAVIDEVDSILIDEARTPLIISGQSMTLATI. . TFQNYFRMYEKLAGMTGTAKTEE. EEFRNIYNMQVVTIPTN
Template Known Secondary structure  TTTTTT




..TTSSS

GGG.






Template Predicted Secondary structure 











..







.







Template SS confidence 









































































   203......210.........220.........230... ......240.........250...... ...260.........270...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions