Return to main results Retrieve Phyre Job Id

Job DescriptionP38036
Confidence99.79%DateThu Jan 5 11:57:49 GMT 2012
Rank73Aligned Residues182
% Identity16%Templated1s2ma1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   292.......300.........310.........320.........330..... ....340.........350.........360.........370
Predicted Secondary structure 















.









Query SS confidence 











































.


































Query Sequence  QPRQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQ. IADSVIFALPTQATANAMLTRMEASASHLFSSPNL
Query Conservation       
             

 







 


  
  
    .   


  


 

  
   
             
Alig confidence 











































.


























..





Template Conservation      

  

  

 
 



 
 






      
                
   
             ..      
Template Sequence  KPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGK. . HCGISC
Template Known Secondary structure  S

T



TTS


TTS
S


SSTT..TTT

Template Predicted Secondary structure 



























..



Template SS confidence 















































































   68.70.........80.........90.........100.........110.........120.........130......... 140.....
 
   371........380.........390.........400.........410.........420.........430.........440.........450
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  ILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLI
Query Conservation   
 
                                          
 
 


 



           
   
   


Alig confidence 


















...........................





















.....






Template Conservation                     ...........................      
               .....  
  

Template Sequence  MVTTGGTNLRDDILRLNET. . . . . . . . . . . . . . . . . . . . . . . . . . . VHILVGTPGRVLDLASRKVADL. . . . . SDCSLFI
Template Known Secondary structure 
SSS
TTS
...........................
S
TT
S

.....TT

Template Predicted Secondary structure 





...........................







.....
Template SS confidence 















































































   146...150.........160.... .....170.........180...... ...190...
 
   451...... ..460.........470.........480.........490.........500........
Predicted Secondary structure 






.


















Query SS confidence 






.


















































Query Sequence  VDEVHAY. DTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYGLHTDPVENN
Query Conservation 




  .       
   
  
       







      
              
Alig confidence 






.
















.
































Template Conservation 


 
      
      
      .  
 
  


    
       
  
  
    
Template Sequence  MDEADKMLSRDFKTIIEQILSFLPP. THQSLLFSATFPLTVKEFMVKHLHKPYEINLME
Template Known Secondary structure  SSSTTS
S.S
S



SS
S


Template Predicted Secondary structure 






.











Template SS confidence 


























































   194.....200.........210........ .220.........230.........240.........250.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions