Return to main results Retrieve Phyre Job Id

Job DescriptionP38036
Confidence95.90%DateThu Jan 5 11:57:49 GMT 2012
Rank231Aligned Residues115
% Identity17%Templated1l8qa2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   296...300.........310.........320.........330.........340.........350.........360.........370.....
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Query Sequence  LQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQIADSVIFALPTQATANAMLTRMEASASHLFSSPNLILAHG
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Template Sequence  VKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYR. . . VIYSSADDFAQAXVEHLKK. . . . . . . . . . . . . . . .
Template Known Secondary structure  TTTTS
SS
SSSSSTT

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   101........110.........120.........130.........140.. .......150.........160.
 
   376...380.........390.........400.........410.........420.........430.........440.........450.....
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Query Sequence  NSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVH
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GTINEFRNXYKSVDLLLLDDVQ
Template Known Secondary structure  ..........................................................T
T
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GG
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   162.......170.........180...
 
   456. ..460.........470.........480.......
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Query Sequence  AY. . DTYMNGLLEAVLKAQADVGGSVILLSATLP
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Template Sequence  FLSGKERTQIEFFHIFNTLYLLEKQIILASDRHP
Template Known Secondary structure  GGTT
TT
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G
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   184.....190.........200.........210.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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