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Job DescriptionP38036
Confidence95.55%DateThu Jan 5 11:57:49 GMT 2012
Rank245Aligned Residues86
% Identity21%Templatec3pfiB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:holliday junction atp-dependent dna helicase ruvb; PDBTitle: 2.7 angstrom resolution crystal structure of a probable holliday2 junction dna helicase (ruvb) from campylobacter jejuni subsp. jejuni3 nctc 11168 in complex with adenosine-5'-diphosphate
Resolution2.69 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   298.300.........310.........320.........330.........340.........350.........360.........370.......
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Query Sequence  VLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQIADSVIFALPTQATANAMLTRMEASASHLFSSPNLILAHGNS
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Template Sequence  AAAKKRNECLDHILFSGPAGLGKTTLANIISYE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . XSANIKTTAAPXI
Template Known Secondary structure  TT




SSTTSS..................................TT

GGG
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   43......50.........60.........70..... ....80........
 
   378.380.........390.........400.........410.........420.........430.........440.........450.......
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Query Sequence  RFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAY
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Template Sequence  EKSGDLAAILTNLS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EGDILFIDEIHRL
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SST

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SGGG
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   8990.........100.. .......110.....
 
   458.460.........470
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Query Sequence  DTYMNGLLEAVLK
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Template Sequence  SPAIEEVLYPAXE
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   116...120........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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