Job Description P38036 Confidence 95.54% Date Thu Jan 5 11:57:49 GMT 2012 Rank 246 Aligned Residues 96 % Identity 16% Template c3ljvA_ PDB info PDB header:transcription Chain: A: PDB Molecule:mmoq response regulator; PDBTitle: crystal structure of mmoq response regulator (fragment 29-302) from2 methylococcus capsulatus str. bath, northeast structural genomics3 consortium target mcr175m Resolution 2.60 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	Y	H	C	L	D	V	A	A	V	A	D	C	W	W	D	Q	S	V	V	L	Q	N	T	F	C	R	N	E	M	L	S	K	Q	R	V	K	A	W	L	L	F	F	I	A	L	H	D	I	G	K	F	D	I	R	F	Q	Y	K	S	A	E	S	W	L	K	L	N	P	A	T	P	S	L	N	G	P	S	T
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		Y	W	Q	K	S	L	A	R	A	V	A	L	Q	S	I	T	A	Q	A	V	A	P	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	T	L	G	L	L	A	D	V	G	R	L	A	L	A	.	T	A	W	P	E	E	Y	S	E	C	L	R	K	A	D	G	E	A	L	I	A	L	E
Template Known Secondary structure															T	T	G	G	G							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T								.										T	T	S	S			T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150																	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	M	C	R	K	F	N	H	G	A	A	G	L	Y	W	F	N	Q	D	S	L	S	E	Q	S	L	G	D	F	F	S	F	F	D	A	A	P	H	P	Y	E	S	W	F	P	W	V	E	A	V	T	G	H	H
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	E	R	F	A	T	D	H	D	E	L	T	R	X	L	L	T	D	W	G	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	V	F	I	D	A	L	Q	L	S	Q
Template Known Secondary structure						S	S													T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.																						.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions