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Job DescriptionP38036
Confidence96.93%DateThu Jan 5 11:57:49 GMT 2012
Rank193Aligned Residues98
% Identity19%Templatec3hc1A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:uncharacterized hdod domain protein; PDBTitle: crystal structure of hdod domain protein with unknown function2 (np_953345.1) from geobacter sulfurreducens at 1.90 a resolution
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.........70......... 80.........90.........100....
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Query Sequence  LIYHCLDVAAVADCWWDQSVVLQNTFCRNEMLSKQRVKAWLLFFIALHDIGKF. . DIRFQYKSAESWLKLNPATPSLNGP
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Template Sequence  LWAHSLGVARIAKLIAERTGFLNP. . . . . . . . . . . . . . VNVYVAGLLHDVGEVFINFFRGKEFSQVVTLVDE. EKITFGQ
Template Known Secondary structure  TT
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   118.120.........130.........140. ........150.........160.........170..... ....180..
 
   105....110.........120.........130.........140.........150.........160
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Query Sequence  STQMCRKFNHGAAGLYWFNQDSLSEQSLGDFFSFFDAAPHPYESWFPWVEAVTGHH
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Template Sequence  AEERLFGTSHCEVGFALAKRWSLN. . . . . . . . . . . . . . . . . . . . . EFICDTILYHH
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   183......190.........200...... ...210.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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