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Job DescriptionP38036
Confidence97.64%DateThu Jan 5 11:57:49 GMT 2012
Rank165Aligned Residues139
% Identity17%Templatec2qy9A_
PDB info PDB header:protein transportChain: A: PDB Molecule:cell division protein ftsy; PDBTitle: structure of the ng+1 construct of the e. coli srp receptor2 ftsy
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   304.....310.........320.........330.........340.........350.........360.........370.........380...
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Query Sequence  PVAPGLTVIEAPTGSGKTETALAYAWKLIDQQIADSVIFALPTQATANAMLTRMEASASHLFSSPNLILAHGNSRFNHLF
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Template Sequence  GKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNN. . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S
TT

TTS
TTT




TT
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   290.........300.........310.........320.........330.........340........
 
   384.....390.........400.........410.........420.........430.........440.........450..... ....460.
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Query Sequence  QSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVH. . AYDTYM
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IPVIAQHTGADSASVI. . FDAIQAAKARNIDVLIADTAGRLQNKSHL
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STT

..TT
S




GGG
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   349350.........360.... .....370.........380.........390...
 
   462.......470........ .480.........490........
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Query Sequence  NGLLEAVLKAQADVGGS. . . . . VILLSATLPMKQKQKLLDTY
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Template Sequence  MEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFH
Template Known Secondary structure  TTT
TT

SGGGT
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   394.....400.........410.........420.........430.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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