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Job DescriptionP38036
Confidence97.42%DateThu Jan 5 11:57:49 GMT 2012
Rank171Aligned Residues179
% Identity15%Templatec2px0D_
PDB info PDB header:biosynthetic proteinChain: D: PDB Molecule:flagellar biosynthesis protein flhf; PDBTitle: crystal structure of flhf complexed with gmppnp/mg(2+)
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   258.260.........270.........280.........290.........300.........310.........320.........330.......
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Query Sequence  QDRQQDASRVLELSGLVSNKRCYEGVHALLDNGYQPRQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQIA
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Template Sequence  ESTKTNTLKKLLRFSVEAGGLTEENVVGKLQEILCDMLPSADKWQEPIHSKYIVLFGSTGAGKTTTLAKLAAISMLEKHK
Template Known Secondary structure  TSSS


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   126...130.........140.........150.........160.........170.........180.........190.........200.....
 
   338.340.... .....350.........360.........370.........380.........390.........400.........410......
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Query Sequence  DSVIFAL. PTQATANAMLTRMEASASHLFSSPNLILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFL
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Template Sequence  KIAFITTDTYRIAAVEQLKTYAELLQAPL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   206...210.........220.........230....
 
   417..420.........430.........440.........450.........460.........470....... ..480.........490....
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Query Sequence  GQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGG. . SVILLSATLPMKQKQKL
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Template Sequence  . . EVCYTKEEFQQAKELFSEYD. . . . . . . . . . HVFVDTAGRNFKDPQYIDELKETIPFESSIQSFLVLSATAKYEDMKHI
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   235....240.........250.... .....260.........270.........280.........290.........300..
 
   495....
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Query Sequence  LDTYG
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Template Sequence  VKRFS
Template Known Secondary structure  TTTSS
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   303....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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