Job Description P38036 Confidence 99.77% Date Thu Jan 5 11:57:49 GMT 2012 Rank 80 Aligned Residues 199 % Identity 16% Template c2oxcA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx20; PDBTitle: human dead-box rna helicase ddx20, dead domain in complex2 with adp Resolution 1.30 Å

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		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.																																												.
Query SS confidence																								.																																												.
Query Sequence		S	G	L	V	S	N	K	R	C	Y	E	G	V	H	A	L	L	D	N	G	Y	Q	.	P	R	Q	L	Q	V	L	V	D	A	L	P	V	A	P	G	L	T	V	I	E	A	P	T	G	S	G	K	T	E	T	A	L	A	Y	A	W	K	L	I	D	Q	Q	.	I	A	D	S	V	I	F	A	L	P	T	Q	A
Query Conservation																								.																																												.
Alig confidence																								.																																												.
Template Conservation
Template Sequence		A	D	F	E	S	L	L	L	S	R	P	V	L	E	G	L	R	A	A	G	F	E	R	P	S	P	V	Q	L	K	A	I	P	L	G	R	C	G	L	D	L	I	V	Q	A	K	S	G	T	G	K	T	C	V	F	S	T	I	A	L	D	S	L	V	L	E	N	L	S	T	Q	I	L	I	L	A	P	T	R	E
Template Known Secondary structure				G	G	G	G	T												T	T			S														T	T									T	T	S	S															T	T	S		S								S	S
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	N	A	M	L	T	R	M	E	A	S	A	S	H	L	F	S	S	P	N	L	I	L	A	H	G	N	S	R	F	N	H	L	F	Q	S	I	K	S	R	A	I	T	E	Q	G	Q	E	E	A	W	V	Q	C	C	Q	W	L	S	Q	S	N	K	K	V	F	L	G	Q	I	G	V	C	T	I	D	Q	V	L
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	A	V	Q	I	H	S	V	I	T	A	I	G	I	K	M	E	G	L	E	C	H	V	F	I	G	G	T	P	L	S	Q	D	K	T	R	L	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	H	I	A	V	G	S	P	G	R	I	K
Template Known Secondary structure														T	T	T	S	T	T								T	T	S									T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180																														.	.	.	.	.	.	.	.	.	190	.	.
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.			.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		I	S	V	L	P	V	K	H	R	F	I	R	G	L	G	I	G	R	S	V	L	I	V	D	E	V	H	A	Y	.	.	D	T	Y	M	N	G	L	L	E	A	V	L	K	A	Q	A	D	V	G	G	S	V	I	L	L	S	A	T	L	P	M	K	Q	K	Q	K	L	L	D	T	Y	G	L	H	T	D	P
Query Conservation																															.	.
Alig confidence												.	.	.	.	.															.	.																		.
Template Conservation												.	.	.	.	.																																		.
Template Sequence		Q	L	I	E	L	D	Y	L	N	P	.	.	.	.	.	G	S	I	R	L	F	I	L	D	E	A	D	K	L	L	E	E	G	S	F	Q	E	Q	I	N	W	I	Y	S	S	L	P	A	.	S	K	Q	M	L	A	V	S	A	T	Y	P	E	F	L	A	N	A	L	T	K	Y	M	R	D	P	T	F	V
Template Known Secondary structure						T	T	S	S		G	.	.	.	.	.	G	G							S	S						S	T	T	S	S											S		S	.	S								S											T	T	T		S	S
Template Predicted Secondary structure												.	.	.	.	.																																		.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.						.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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