Job Description P38036 Confidence 97.93% Date Thu Jan 5 11:57:49 GMT 2012 Rank 156 Aligned Residues 65 % Identity 22% Template c2gk7A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:regulator of nonsense transcripts 1; PDBTitle: structural and functional insights into the human upf1 helicase core Resolution 2.80 Å

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		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	L	Q	V	L	V	D	A	L	P	V	A	P	G	L	T	V	I	E	A	P	T	G	S	G	K	T	E	T	A	L	A	Y	A	W	K	L	I	D	Q	Q	I	A	D	S	V	I	F	A	L	P	T	Q	A	T	A	N	A	M	L	T	R	M	E	A
Query Conservation
Alig confidence																																													.
Template Conservation																																													.
Template Sequence		N	H	S	Q	V	Y	A	V	K	T	V	L	Q	R	P	L	S	L	I	Q	G	P	P	G	T	G	K	T	V	T	S	A	T	I	V	Y	H	L	A	R	Q	G	N	.	G	P	V	L	V	C	A	P	S	N	I	A	V	D	Q	L	T	E	K	I	H	Q
Template Known Secondary structure													T	T	S	S								T	T	S																T		S	.	S							S	S													T
Template Predicted Secondary structure																																													.
Template SS confidence
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.		.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions