Job Description P38036 Confidence 97.31% Date Thu Jan 5 11:57:49 GMT 2012 Rank 175 Aligned Residues 110 % Identity 22% Template c2b8tA_ PDB info PDB header:transferase Chain: A: PDB Molecule:thymidine kinase; PDBTitle: crystal structure of thymidine kinase from u.urealyticum in2 complex with thymidine Resolution 2.00 Å

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		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	L	T	V	I	E	A	P	T	G	S	G	K	T	E	T	A	L	A	Y	A	W	K	L	I	D	Q	Q	I	A	D	S	V	I	F	A	L	P	T	Q	A	T	A	N	A	M	L	T	R	M	E	A	S	A	S	H	L	F	S	S	P	N	L	I	L	A	H	G	N	S	R	F	N	H	L	F	Q	S	I
Query Conservation
Alig confidence																															.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.										.	.	.	.	.	.	.
Template Conservation																															.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.										.	.	.	.	.	.	.
Template Sequence		G	W	I	E	F	I	T	G	P	M	F	A	G	K	T	A	E	L	I	R	R	L	H	R	L	E	Y	A	D	.	.	V	K	Y	L	V	F	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	D	T	R	S	I	R	N	.	.	I	Q	S	R	T	G	T	S	L	.	.	.	.	.	.	.
Template Known Secondary structure										S	T	T	S																T	T	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.				G	G	G		S	S	.	.								S	S	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.										.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.															.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	R	A	I	T	E	Q	G	Q	E	E	A	W	V	Q	C	C	Q	W	L	S	Q	S	N	K	K	V	F	L	G	Q	I	G	V	C	T	I	D	Q	V	L	I	S	V	L	P	V	K	H	R	F	I	R	G	L	G	I	G	R	S	V	L	I	V	D	E	V	H	A	Y	D	T	Y	M	N	G	L	L	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.															.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.															.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	V	E	V	E	S	A	P	E	I	L	N	Y	I	M	S	N	S	F	N	D	.	.	.	.	.	.	E	T	K	V	I	G	I	D	E	V	Q	F	F	D	.	.	.	.	D	R	I	C
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S	T									S	T	T	S		T	.	.	.	.	.	.	T								S	G	G	G	S		.	.	.	.	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.															.	.	.	.
Template SS confidence
																																67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.							.	90	.	.	.	.	.	.	.	.	.	100	.	.					.	.	.	.
		467	.	.	470	.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	L	K	A	Q	A	D	V	G	G	S	V	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	A	N	I	L	A	E	N	G	F	V	V	I	I
Template Known Secondary structure										T	T
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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