Job Description P38036 Confidence 96.92% Date Thu Jan 5 11:57:49 GMT 2012 Rank 194 Aligned Residues 132 % Identity 10% Template c1u9iA_ PDB info PDB header:circadian clock protein Chain: A: PDB Molecule:kaic; PDBTitle: crystal structure of circadian clock protein kaic with phosphorylation2 sites Resolution 2.80 Å

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		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	G	L	T	V	I	E	A	P	T	G	S	G	K	T	E	T	A	L	A	Y	A	W	K	L	I	D	Q	Q	I	A	D	S	V	I	F	A	L	P	T	Q	A	T	A	N	A	M	L	T	R	M	E	A	S	A	S	H	L	F	S	S	P	N	L	I	L	A	H	G	N	S	R	F	N	H	L	F	Q	S
Query Conservation
Alig confidence																																.	.									.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.									.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	S	I	I	L	A	T	G	A	T	G	T	G	K	T	L	L	V	S	R	F	V	E	N	A	C	A	N	K	.	.	E	R	A	I	L	F	A	Y	.	.	.	.	.	E	E	S	R	A	Q	L	L	R	N	A	Y	S	W	G	M	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S									T	T	S	S														T	T	T	.	.								S	.	.	.	.	.	S	S											T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.									.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.			310	.	.	.	.	.	.	.						.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.						.	.	.	.	.	460
Predicted Secondary structure																																																																							.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.
Query Sequence		I	K	S	R	A	I	T	E	Q	G	Q	E	E	A	W	V	Q	C	C	Q	W	L	S	Q	S	N	K	K	V	F	L	G	Q	I	G	V	C	T	I	D	Q	V	L	I	S	V	L	P	V	K	H	R	F	I	R	G	L	G	I	G	R	S	V	L	I	V	D	E	V	.	.	.	.	.	H	A	Y	D	T	Y
Query Conservation																																																																							.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.																	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	E	M	E	R	Q	N	L	L	K	I	V	C	A	Y	P	E	S	A	G	L	E	D	H	L	Q	I	I	K	.	.	.	.	.	.	S	E	I	N	D	F	K	P	A	R	I	A	I	D	S	L	S	A	L	A	R	G	V	S	N	N	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	S								G	G	G	S											.	.	.	.	.	.					T	T			S											T	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Template SS confidence
																			335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.							.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	G	L	L	E	A	V	L	K	A	Q	A	D	V	G	G	S	V	I	L	L	S	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	R	Q	F	V	I	G	V	T	G	Y	A	K	Q	E	E	I	T	G	L	F	T	N	T	S
Template Known Secondary structure																T	T
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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