Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGD7
Confidence96.01%DateThu Jan 5 11:28:50 GMT 2012
Rank400Aligned Residues84
% Identity23%Templated2b8ta1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Type II thymidine kinase
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   101........110.........120.........130...... ...140.........150.........160.........170........
Predicted Secondary structure 









..













Query SS confidence 



































. .









































Query Sequence  AVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVS. . ADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKE
Query Conservation   





  
 




 



     
 

 
 

 ..


 
 

 



  
   


        

  
   

  
Alig confidence 


























.







..


.


.....









.


















Template Conservation   
  
 











         .
 


  

  
 .
  .....  
 

 
  .  
  
     
       
Template Sequence  WIEFITGPMFAGKTAELIRRLHRLEYA. DVKYLVFKPKIDT. RSI. . . . . RNIQSRTGTS. LPSVEVESAPEILNYIMSN
Template Known Secondary structure 
STTS
T.T




G.GG
.....SS






S.S

SSTST
Template Predicted Secondary structure 




.





.


.....





.




Template SS confidence 















































































   13......20.........30......... 40.........50.. ... ....60..... ....70.........80....
 
   179180.........190..
Predicted Secondary structure 





Query SS confidence 













Query Sequence  AKLKFYDVLLVDTA
Query Conservation 

    







Alig confidence 













Template Conservation        


 



Template Sequence  SFNDETKVIGIDEV
Template Known Secondary structure  TS
TT


SG
Template Predicted Secondary structure 








Template SS confidence 













   85....90........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions