 |
Job Description | P0AGD7 | Confidence | 96.92% | Date | Thu Jan 5 11:28:50 GMT 2012 |
Rank | 271 | Aligned Residues | 101 |
% Identity | 14% | Template | d1v5wa_ |
SCOP info | P-loop containing nucleoside triphosphate hydrolases
| P-loop containing nucleoside triphosphate hydrolases
| RecA protein-like (ATPase-domain)
|
Resolution | 3.20 |
|
 |
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | E | L | V | A | A | M | G | E | E | N | Q | T | L | N | L | A | A | Q | P | P | A | V | V | L | M | A | G | L | Q | G | A | G | K | T | T | S | V | G | K | L | G | K | F | L | R | E | K | H | . |
. |
. |
. |
. |
K | K | K | V | L | V | V | S | A | D | V | Y | R | P | A | A | I | K | Q | L | E | T | L | A | E | Q |
Query Conservation |   |
  |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|   |   |
|   |
|
|
|
|
|   |
|
|
|
|   |   |   |   |   |
|   | . | . | . | . | . |
|
|   |
|   |
|
|   |
|
|
|   |
|   |
|
|   |
|
|
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|
|   |
|
|
|   | . | . | . | . | . | . | . |   |
|   |   |   |   |
|   |
|   |   |
|
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   | . | . |   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
Q | E | F | D | K | L | L | G | G | G | I | E | . |
. |
. |
. |
. |
. |
. |
S | M | A | I | T | E | A | F | G | E | F | R | T | G | K | T | Q | L | S | H | T | L | C | V | T | A | Q | L | P | G | A | G | G | Y | P | G | G | K | I | I | F | I | D | T | E | N | T | F | R | . |
. |
P | D | R | L | R | D | I | A | D | R |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T | S | S | B |
| . | . | . | . | . | . | . | S | S |  |  |  |  |  |  |
|
| T | T |
| T |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| B | T | T | T | B |
|
|
|  |  |  |  |  |  | S | S | S |
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
106 | . | . | . | 110 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | |
|
. | . | . | 170 | . | . | . | . | . | . |
  |
  |   |
155 | . | . | . | . | |
|
|
|
|
|
|
|
|
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|  | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | G | V | D | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
F | P | S | D | V | G | Q | K | P | V | D | I | V | N | A | A | L | K | E | A | K | L | K | F | Y | D | V | L | L | V |
Query Conservation |   |
  |
|
|
|   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
F | N | V | D | H | D | A | V | L | D | N | V | L | Y | A | R | A | Y | T | S | E | H | Q | M | E | L | L | D | Y | V | A | A | K | F | H | E | E | A | G | I | F | K | L | L |
Template Known Secondary structure |   |
T | T |
|
|  |  |  |  |  |  | T |  |  |  |  |  |
|
| S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
| S | S |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
177 | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|