 |
Job Description | P0AGD7 | Confidence | 97.66% | Date | Thu Jan 5 11:28:50 GMT 2012 |
Rank | 136 | Aligned Residues | 115 |
% Identity | 19% | Template | d1u94a1 |
SCOP info | P-loop containing nucleoside triphosphate hydrolases
| P-loop containing nucleoside triphosphate hydrolases
| RecA protein-like (ATPase-domain)
|
Resolution | 1.90 |
|
 |
  |   |
101 | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | |
. | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | V | V | L | M | A | G | L | Q | G | A | G | K | T | T | S | V | G | K | L | G | K | F | L | R | E | K | H | K | K | K | V | L | V | V | S | A | . |
D | V | Y | R | P | A | A | I | K | Q | L | E | T | L | A | E | Q | V | G | V | D | F | F | P | S | D | V | G | Q | K | P | V | D | I | V | N | A | A | L | K | E | A |
Query Conservation |   |
  |
|
|
|
|
|
|   |   |
|   |
|
|
|
|
|   |
|
|
|
|   |   |   |   |   |
|   |
|
|   |
|   |
|
|   |
| . |
|
|   |
|   |
|
|   |
|
|
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |
|   |
|
|   |
|
|
|   |
|   |
|   |   |   |   |   |   |   | . |   |   |
|   |   |
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |
| . | . | . | . | . |
|   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | I | V | E | I | Y | G | P | E | S | S | G | K | T | T | L | T | L | Q | V | I | A | A | A | Q | . |
R | E | G | K | T | C | A | F | I | D | A | E | H | A | L | D | P | I | Y | A | R | K | L | . |
. |
. |
. |
. |
G | V | D | I | D | N | L | L | C | S | Q | P | D | T | G | E | Q | A | L | E | I | C | D | A | L | A |
Template Known Secondary structure |   |
S |  |  |  |  |  |
| S | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  | T | T |
|
|  |  |  |  |  | S | S |
|
|
|
|  |  |  |  |  |  | T | . | . | . | . | . | T |
|
| G | G | G |
|  |  |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . |
  |
  |   |
180 | . | . | . | . | . | . | . | . | . | 190 | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | L | K | F | Y | D | V | L | L | V | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | A | G | R | L | H | V | D | E | A | M | M | D | E | I | K | Q | V | H | A | S | I | N | P | V | E | T | L | F | V | V |
Query Conservation |   |
|   |   |   |   |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|   |   |   |
|   |   |
|
|   |
|
|   |   |
|   |   |   |   |   |
|   |
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |
|
|   |
Template Sequence |   |
R | S | G | A | V | D | V | I | V | V | D | S | V | A | A | L | T | P | K | A | E | I | E | G | E | G | L | A | A | R | M | M | S | Q | A | M | R | K | L | A | G | N | L | K | Q | S | N | T | L | L | I | F |
Template Known Secondary structure |   |
 |  | T |
|
| S |  |  |  |  |  |
| G | G | G |
|
|
|  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
134 | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|