Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGD7
Confidence97.11%DateThu Jan 5 11:28:50 GMT 2012
Rank241Aligned Residues188
% Identity15%Templated1nksa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nucleotide and nucleoside kinases
Resolution2.57

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   101........110.........120.........130.........140.........150.........160.........170.........180
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  AVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAK
Query Conservation   





  
 




 



     
 

 
 

 


 
 

 



  
   


        

  
   

  

Alig confidence 















































































Template Conservation 


 
 
  






   
   
                                                        
Template Sequence  KIGIVTGIPGVGKSTVLAKVKEILDNQGINNKIINYGDFMLATALKLGYAKDRDEMRKLSVEKQKKLQIDAAKGIAEEAR
Template Known Secondary structure 
TTS
TTT

TTTS
SSTTS
Template Predicted Secondary structure 















Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   181........190.........200....... ..210.........220.........230.........240.........250.........
Predicted Secondary structure 











.




















Query SS confidence 


























.



















































Query Sequence  LKFYDVLLVDTAGRLHVDEAMMDEIKQ. VHASINPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAA
Query Conservation      









   
  

 

  .
     
 
 





  

 
   
  
       







  



 
Alig confidence 


























.



















































Template Conservation        

 
                                        
              
              
Template Sequence  AGGEGYLFIDTHAVIRTPSGYLPGLPSYVITEINPSVIFLLEADPKIILSRQKRDTTRNRNDYSDESVILETINFARYAA
Template Known Secondary structure  T
SS
STTSS


S


TTT





S
Template Predicted Secondary structure 

























Template SS confidence 















































































   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   260.........270.........280.........290.....
Predicted Secondary structure 















Query SS confidence 



































Query Sequence  LSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRIL
Query Conservation 

    
  

 





 




 
 
   
 


Alig confidence 


















.......









Template Conservation              

 
   .......   
    

Template Sequence  TASAVLAGSTVKVIVNVEG. . . . . . . DPSIAANEII
Template Known Secondary structure  T


SS.......
Template Predicted Secondary structure 







.......
Template SS confidence 



































   162.......170.........180 .........190
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions