 |
Job Description | P0AGD7 | Confidence | 95.59% | Date | Thu Jan 5 11:28:50 GMT 2012 |
Rank | 447 | Aligned Residues | 127 |
% Identity | 16% | Template | d1n0ua2 |
SCOP info | P-loop containing nucleoside triphosphate hydrolases
| P-loop containing nucleoside triphosphate hydrolases
| G proteins
|
Resolution | 2.12 |
|
 |
  |   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | Q | P | P | A | V | V | L | M | A | G | L | Q | G | A | G | K | T | T | S | V | G | K | L | G | K | F | L | R | E | K | H | K | K | K | V | L | V | V | S | A | D | V | Y | R | P | A | A | I | K | Q | L | E | T | L | A | E | Q | V | G | V | D | F | F | P | S | D | V | G | Q | K | P | V | D | I | V | N | A | A |
Query Conservation |   |
  |   |   |   |
|   |
|
|
|
|
|
|   |   |
|   |
|
|
|
|
|   |
|
|
|
|   |   |   |   |   |
|   |
|
|   |
|   |
|
|   |
|
|
|   |
|   |
|
|   |
|
|
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |
|
|
|
|
|
|
|
|   |   |
|   |
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |
| . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
K | V | T | N | V | R | N | M | S | V | I | A | H | V | D | H | G | K | S | T | L | T | D | S | L | V | Q | R | A | G | I | I | . |
S | A | G | I | T | I | K | S | T | A | I | S | L | Y | S | E | M | S | D | E | D | V | K | E | I | K | Q | K | T | D | G | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
| G | G | G |  |  |  |  |  |  |  |
|
| G | G | G | T |  |  |  |  |  |  |  |  |  |  |  |  | B |
|
| . | B |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
| S | S |
|
|
| S | S | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  | . |
|
|
|
|
|  |  |  |
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
176 | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | |
|
. | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | K | E | A | K | L | K | F | Y | D | V | L | L | V | D | T | A | G | R | L | H | V | D | E | A | M | M | D | E | I | K | Q | V | H | A | S | I | N | P | V | E | T | L | F | V | V | D | A | M | T | . |
. |
G | Q | D | A | A | N | T | A | K | A | F | N | E | A | L | P | L | T | G | V | V | L | T | K | V | D |
Query Conservation |   |
|   |   |
|
|   |   |   |   |
|
|
|
|
|
|
|
|
|
|   |   |   |
|   |   |
|
|   |
|
|   |   |
|   |   |   |   |   |
|   |
|   |
|
|
|
|
|
|   |   | . | . |
|
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
Alig confidence |   |
. | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . |   |   |   |   |   |   |
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |
|   |   |
|   |
|
|
|
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
S | F | L | I | N | L | I | D | S | P | G | H | V | D | F | S | S | E | V | T | A | A | L | R | V | . |
. |
. |
. |
. |
. |
T | D | G | A | L | V | V | V | D | T | I | E | G | V | C | V | Q | T | E | T | V | L | R | Q | A | L | G | E | R | I | K | P | V | V | V | I | N | K | V | D |
Template Known Secondary structure |   |
. | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
| S | S |
|  |  |  |  |  |  |  |  | T | . | . | . | . | . | . |
| S |  |  |  |  |  |  |  | T | T | T | B | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |
|  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|