Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGD7
Confidence96.66%DateThu Jan 5 11:28:50 GMT 2012
Rank310Aligned Residues155
% Identity10%Templated1lw7a2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nucleotide and nucleoside kinases
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   100.........110.........120.........130.........140.........150.........160.........170.........
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  PAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEA
Query Conservation 
 





  
 




 



     
 

 
 

 


 
 

 



  
   


        

  
   

  
Alig confidence 
























...........











































Template Conservation   
 


 
  






   

  
...........      
       
                             
Template Sequence  AKTVAILGGESSGKSVLVNKLAAVF. . . . . . . . . . . NTTSAWEYGREFVFEKLGGDEQAMQYSDYPQXALGHQRYIDYAV
Template Known Secondary structure 


TTST...........T


TTSSSS
TTSS
TTT
Template Predicted Secondary structure 





...........













Template SS confidence 















































































   226...230.........240.........250 .........260.........270.........280.........290....
 
   180.........190.........200.... .....210.........220.........230. ........240.........250
Predicted Secondary structure 











......








...






Query SS confidence 
























. . . . . .


























. . .


















Query Sequence  KLKFYDVLLVDTAGRLHVDEAMMDE. . . . . . IKQVHASINPVETLFVVDAMTGQDAAN. . . TAKAFNEALPLTGVVLTKV
Query Conservation 
    









   
  

 
......
  
     
 
 





  

 
  ... 
  
       






Alig confidence 



.



















......


























...


















Template Conservation      .  

 
        
                     
    
                           
 
   
Template Sequence  RHSH. KIAFIDTDFITTQAFCIQYEGKAHPFLDSXIKEYPFDVTILLKNNTEQKQRQQFQQLLKKLLDKYKVPYIEIESP
Template Known Secondary structure 
S.SSS
S


S

S





SGGG



S
Template Predicted Secondary structure 

.





























Template SS confidence 















































































   295... .300.........310.........320.........330.........340.........350.........360.........370...
 
   251........260......
Predicted Secondary structure 




Query SS confidence 















Query Sequence  DGDARGGAALSIRHIT
Query Conservation 
  



 


    
Alig confidence 















Template Conservation     
    
   
   
Template Sequence  SYLDRYNQVKAVIEKV
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 















   385....390.........400
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions