Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGD7
Confidence97.68%DateThu Jan 5 11:28:50 GMT 2012
Rank134Aligned Residues138
% Identity17%Templated1g41a_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4950.........60.........70.........80.........90.........100.........110.........120........
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  REFINRVKEKAVGHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKLGKFLREKH
Query Conservation    
   

                 
 


  

  

             
 





  
 




 



     
 
Alig confidence 














.....
















...



































....
Template Conservation        
   



 ..... 

  
  
        ...           
  


 







 

  

  
....
Template Sequence  REIVSELDQHIIGQA. . . . . DAKRAVAIALRNRWRRM. . . QLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLA. . . .
Template Known Secondary structure  TT

S
........S
TTTTTT






TTSST....
Template Predicted Secondary structure 



........
















....
Template SS confidence 















































































   7..10.........20. ........30........ .40.........50.........60.........70....
 
   129130.........140. ........150.........160.........170.........180.........190......
Predicted Secondary structure 






............


















Query SS confidence 












. . . . . . . . . . . .






















































Query Sequence  KKKVLVVSADVYR. . . . . . . . . . . . PAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLH
Query Conservation 

 
 

 


 
............ 

 



  
   


        

  
   

  

    









  
Alig confidence 












............






















































Template Conservation        
                 
                                            

 



    
Template Sequence  NAPFIKVEATKFTVGKEVDSIIRDLTDSAMKLVRQQEIAKNRLIDDEAAKLINPEELKQKAIDAVEQNGIVFIDEIDKIC
Template Known Secondary structure  T

GGGG




TS



GGGS
SS


TGGGGS
Template Predicted Secondary structure 




























Template SS confidence 















































































   75....80.........90.........100.........110.........120.........130.........140.........150....
 
   197.
Predicted Secondary structure 

Query SS confidence 

Query Sequence  VD
Query Conservation   
Alig confidence 

Template Conservation    
Template Sequence  KK
Template Known Secondary structure 

Template Predicted Secondary structure 

Template SS confidence 

   264.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions