Job Description P0AGD7 Confidence 96.60% Date Thu Jan 5 11:28:50 GMT 2012 Rank 322 Aligned Residues 156 % Identity 12% Template c3te6A_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:regulatory protein sir3; PDBTitle: crystal structure of the s. cerevisiae sir3 aaa+ domain Resolution 2.80 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.
Predicted Secondary structure																																																																												.	.	.	.
Query SS confidence																																																																												.	.	.	.
Query Sequence		F	I	N	R	V	K	E	K	A	V	G	H	E	V	N	K	S	L	T	P	G	Q	E	F	V	K	I	V	R	N	E	L	V	A	A	M	G	E	E	N	Q	T	L	N	L	A	A	Q	P	P	A	V	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	.	.	.	.	R	E
Query Conservation																																																																												.	.	.	.
Alig confidence																			.	.	.																		.	.	.	.	.	.	.	.	.																													.	.	.	.
Template Conservation																			.	.	.																		.	.	.	.	.	.	.	.	.
Template Sequence		L	E	E	S	I	R	E	S	L	Q	K	R	E	L	L	K	S	.	.	.	Q	V	E	D	F	T	R	I	F	L	P	I	Y	D	S	L	X	.	.	.	.	.	.	.	.	.	S	S	Q	N	K	L	F	Y	I	T	N	A	D	D	S	T	K	F	Q	L	V	N	D	V	X	D	E	L	I	T	S	S	A	R
Template Known Secondary structure																			.	.	.																		.	.	.	.	.	.	.	.	.	T	T												S																	T	T	T	T
Template Predicted Secondary structure																			.	.	.																		.	.	.	.	.	.	.	.	.
Template SS confidence
		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.				.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.										.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	F	F	P	S	D	V	G	Q	K	P	V	D	I	V	N	A	A	L	K	E	A	.	.	K	L	K	F	Y	D	V	L	L	V	D	T	A	G	R	L	H	V	D	E	A	M	M	D	E
Query Conservation																																																							.	.
Alig confidence																		.																.	.	.	.	.																	.	.
Template Conservation																		.																.	.	.	.	.
Template Sequence		K	E	L	P	I	F	D	Y	I	H	I	D	A	L	E	L	.	X	D	A	L	Y	E	K	I	W	F	A	I	S	K	E	.	.	.	.	.	N	G	D	I	S	L	E	A	L	N	F	Y	I	T	N	V	P	K	A	K	K	R	K	T	L	I	L	I	Q	N	P	E	N	L	L	S	E	K	I	L	Q	Y	F
Template Known Secondary structure		T	S	S										T	T			.													S			.	.	.	.	.																S		G	G	G	S											S	S	S			T
Template Predicted Secondary structure																		.																.	.	.	.	.
Template SS confidence
		603	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.		.	620	.	.	.	.	.	.	.	.	.	630	.	.	.						.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	Q	V	H	A	S	I	N	P	V	E	T	L	F	V	V	D	A	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	W	I	S	S	K	N	S	K	L	S	I	I	C	V	G	G	H	N
Template Known Secondary structure								S	S											S	S
Template Predicted Secondary structure
Template SS confidence
		681	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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