Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGD7
Confidence96.35%DateThu Jan 5 11:28:50 GMT 2012
Rank356Aligned Residues111
% Identity17%Templatec3tauB_
PDB info PDB header:transferaseChain: B: PDB Molecule:guanylate kinase; PDBTitle: crystal structure of a putative guanylate monophosphaste kinase from2 listeria monocytogenes egd-e
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   99100.........110.........120.........130.........140...
Predicted Secondary structure 
















...................................
Query SS confidence 












































. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  PPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation   
 





  
 




 



     
 

 
 

 


 
 
...................................
Alig confidence 

























.

















...................................
Template Conservation 

 

 
 
 







   
    .          
                     
                    
Template Sequence  RGLLIVLSGPSGVGKGTVREAVFKDP. ETSFDYSISXTTRLPREGEQDGVDYYFRSREVFEQAIKDGKXLEYAEYVGNYY
Template Known Secondary structure 



STTSSST.T





SS


TT

BTTTB

TT
TT
Template Predicted Secondary structure 








.






















Template SS confidence 















































































   4.....10.........20......... 30.........40.........50.........60.........70.........80..
 
   144.....150.........160.........170.........180.........190.........200.........210........
Predicted Secondary structure  ..
























Query SS confidence  . .










































































Query Sequence  . . AIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETL
Query Conservation  ..
 



  
   


        

  
   

  

    









   
  

 

  
     
 
 
Alig confidence  ..





























.......












.























Template Conservation        
          
  
           .......      
 



 .            

         
Template Sequence  GTPLEYVEEKLAAGVDIFLEIEVQGAXQVRKA. . . . . . . XPEGIFIFLTPPD. LSEEERXETAKKEIEXXASYDYAV
Template Known Secondary structure  TT



.......
TTS
GG.GT

TTSS
Template Predicted Secondary structure 






.......







.



Template SS confidence 












































































   83......90.........100.........110.... .....120....... ..130.........140.........150.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions