Job Description P0AGD7 Confidence 97.08% Date Thu Jan 5 11:28:50 GMT 2012 Rank 245 Aligned Residues 131 % Identity 15% Template c3rc8A_ PDB info PDB header:hydrolase/rna Chain: A: PDB Molecule:atp-dependent rna helicase supv3l1, mitochondrial; PDBTitle: human mitochondrial helicase suv3 in complex with short rna fragment Resolution 2.90 Å

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		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	P	A	V	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	F	F	P	S	D	V	G	Q	K	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.																		.	.														.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.																		.	.														.
Template Sequence		Q	R	K	I	I	F	H	S	G	P	T	N	S	G	K	T	.	.	.	.	.	Y	H	A	I	Q	K	Y	F	S	A	K	S	G	V	Y	C	G	.	.	P	L	K	L	L	A	H	E	I	F	E	K	S	.	N	A	A	G	V	P	C	D	L	V	T	G	E	E	R	V	T	V	Q	P	N	G	K	Q	A	S
Template Known Secondary structure											S	S	S	S	S	T	T	.	.	.	.	.										S	S	S						.	.	S	S												.			T	T								S	S						S	S	S	S				S
Template Predicted Secondary structure																		.	.	.	.	.																		.	.														.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.						.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
						168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	P	V	D	I	V	N	A	A	L	K	E	A	K	L	K	F	Y	D	V	L	L	V	D	T	A	G	R	L	H	V	D	E	A	M	M	D	E	I	K	Q	V	H	A	S	I	N	P	V	E	T	L	F	V	V	D	A	M	T	G	Q	D	A	A	N	T	A	K	A	F	N	E	A	L	P	L	T
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.							.	.	.	.	.	.																																														.	.	.	.	.
Template Conservation												.	.	.	.	.	.																																														.	.	.	.	.
Template Sequence		H	V	S	C	T	V	E	M	C	S	.	.	.	.	.	.	V	T	T	P	Y	E	V	A	V	I	D	E	I	Q	M	I	R	D	P	A	R	G	W	A	W	T	R	A	L	L	G	L	C	A	E	E	V	H	L	C	G	E	P	A	A	.	.	.	.	.	I	D	L	V	M	E	L	M	Y	T	T	G	E	E
Template Known Secondary structure							G	G	G			.	.	.	.	.	.	S	S	S										G	G	G	G	G		T	T	T																						G	G	G	.	.	.	.	.												T
Template Predicted Secondary structure												.	.	.	.	.	.																																														.	.	.	.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280							.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.						.	.	.	.	330	.	.	.	.	.	.	.	.	.
		244	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	V	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	V	R	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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