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Job DescriptionP0AGD7
Confidence97.15%DateThu Jan 5 11:28:50 GMT 2012
Rank234Aligned Residues114
% Identity22%Templatec3k53B_
PDB info PDB header:metal transportChain: B: PDB Molecule:ferrous iron transport protein b; PDBTitle: crystal structure of nfeob from p. furiosus
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   101........110.........120.........130.........140.........150.........160.........170.........180
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Query Sequence  AVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAK
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Template Sequence  KTVALVGNPNVGKTTIFNALT. . . . . . . GLRQHVGNWPG. . . . . . . . . . . . . . . VTVEKKEGIME. . . . . . . . . . . . . . .
Template Known Secondary structure 
TTSS.......TT

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   4.....10.........20.... .....30..... ....40......
 
   181........190.........200....... ..210.........220.........230.........240..... ....250.
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Query Sequence  LKFYDVLLVDTAGRLHVDEAMMDEIKQ. . VHASINPVETLFVVDAMTGQDAANTAKAFNEALPLTGV. VLTKVD
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Template Sequence  YREKEFLVVDLPGIYSLTAHSIDELIARNFILDGNADVIVDIVDSTCLMRNLFLTLELFEMEVKNIILVLNKFD
Template Known Secondary structure  TT



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SSSTT

SGGGTT

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   47..50.........60.........70.........80.........90.........100.........110.........120
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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