Job Description P0AGD7 Confidence 97.09% Date Thu Jan 5 11:28:50 GMT 2012 Rank 244 Aligned Residues 142 % Identity 15% Template c3izq1_ PDB info PDB header:ribosomal protein,hydrolase Chain: 1: PDB Molecule:elongation factor 1 alpha-like protein; PDBTitle: structure of the dom34-hbs1-gdpnp complex bound to a translating2 ribosome Resolution 9.50 Å

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120												.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																		.																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	E	E	N	Q	T	L	N	L	A	A	Q	P	P	A	V	.	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	.	.	.	.	.	.	.	.	.	.	.	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q
Query Conservation																		.																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	L	K	K	K	K	T	P	V	K	S	A	L	P	H	L	S	F	V	V	L	G	H	V	D	A	G	K	S	T	L	M	G	R	L	L	Y	D	L	N	I	V	N	Q	S	Q	L	R	K	L	Q	R	E	S	E	T	M	G	K	S	S	F	K	F	A	W	I	M	D	Q	T	N	E	E	R	E	R	G	V	T
Template Known Secondary structure		T	T		S	S	S																		S	S	S											S		S	S		S												S	S		S	S	S	S			S	S	S												T	T	T
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		V	G	V	D	F	F	P	S	D	V	G	Q	K	P	V	D	I	V	N	A	A	L	K	E	A	K	L	K	F	Y	D	V	L	L	V	D	T	A	G	R	L	H	V	D	E	A	M	M	D	E	I	K	Q	V	H	A	S	I	N	P	V	E	T	L	F	V	V	D	A	M	T	G	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.									.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.									.	.	.	.	.
Template Sequence		V	S	I	C	T	S	H	F	S	T	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	N	F	T	I	V	D	A	P	G	.	H	R	D	F	V	P	N	A	.	.	.	.	.	I	M	G	I	S	Q	A	D	M	A	I	L	C	V	D	C	S	T	N	A	F	E	S	G	F	D	L
Template Known Secondary structure			S		S							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S										S	.	S	S							.	.	.	.	.	T	T	T	S	S			S									S						T	T			T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.									.	.	.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.																		.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.						.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		Q	D	A	A	N	T	A	K	A	F	N	E	A	L	P	L	T	G	V	V	L	.	.	T	K	V	D
Query Conservation																							.	.
Alig confidence																							.	.
Template Conservation
Template Sequence		D	G	Q	T	K	E	H	M	L	L	A	S	S	L	G	I	H	N	L	I	I	A	M	N	K	M	D
Template Known Secondary structure		T	S											T	T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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