Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGD7
Confidence98.73%DateThu Jan 5 11:28:50 GMT 2012
Rank46Aligned Residues194
% Identity13%Templatec3io3A_
PDB info PDB header:chaperoneChain: A: PDB Molecule:deha2d07832p; PDBTitle: get3 with adp from d. hansenii in closed form
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   95....100.........110.........120...... ...130.........140.........150.........160.........170...
Predicted Secondary structure 











.

















Query SS confidence 































.














































Query Sequence  LAAQPPAVVLMAGLQGAGKTTSVGKLGKFLRE. KHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVN
Query Conservation       
 





  
 




 



     .
 

 
 

 


 
 

 



  
   


        

  
  
Alig confidence 































.

















....






















..
Template Conservation        


  
 







 
 


  



  
 





 


  

....  
          
     
   ..
Template Sequence  VQHDSLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPAHNLS. . . . DAFCQKFGKDARKVEGLPNLSCM. .
Template Known Secondary structure  T
TT
S
STTSS
TTS


SS
....TS


SS
TT..
Template Predicted Secondary structure 




















....












..
Template SS confidence 















































































   13......20.........30.........40.........50.........60... ......70.........80......
 
   174.....180.........190.........200.........210.........220...... ...230......... 240.........250
Predicted Secondary structure 




















..
.





Query SS confidence 




















































. .












.










Query Sequence  AALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTG. . QDAANTAKAFNEA. LPLTGVVLTKV
Query Conservation   

  

    









   
  

 

  
     
 
 





  
..
 
   
  
   .    






Alig confidence  ......














































..












.










Template Conservation  ......     
 



  
                        
 
  
    
                   



 
Template Sequence  . . . . . . EIDPYKTIIFDTAPTGHTLRFLQSEVNEQFTNPELTTFICVCISEFLSLYETERMIQELMSYNMDVNSIVVNQL
Template Known Secondary structure  ......





SST

T
TTTSSTT



Template Predicted Secondary structure  ......

























Template SS confidence 















































































   87..90.........100.........110.........120.........130.........140.........150.........160
 
   251.... ....260...... ...270......... 280.........290.........300..
Predicted Secondary structure 




...........







.











Query SS confidence 




. . . . . . . . .










. .












.






















Query Sequence  DGDAR. . . . . . . . . GGAALSIRHIT. . GKPIKFLGVGEKT. EALEPFHPDRIASRILGMGDVLS
Query Conservation 
  

.........

 


    
..  

 





 
.



 
 
   
 







  
Alig confidence 




.........










..












.




..















Template Conservation            
          
        
   
           ..
  

  
     
  
Template Sequence  LFAECKRCESRWKMQKKYLDQMGELYEDYHLVKMPLLGCEIRGVEN. . LKKFSKFLLKPYDPKA
Template Known Secondary structure 




TTTS

SS


S..S


TTT
Template Predicted Secondary structure 
















..






Template SS confidence 































































   271........280.........290.........300.........310...... ...320.........330..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions