Job Description P0AGD7 Confidence 97.86% Date Thu Jan 5 11:28:50 GMT 2012 Rank 107 Aligned Residues 203 % Identity 15% Template c3gehA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:trna modification gtpase mnme; PDBTitle: crystal structure of mnme from nostoc in complex with gdp, folinic2 acid and zn Resolution 3.20 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		D	R	L	S	R	T	L	R	N	I	S	G	R	G	R	L	T	E	D	N	V	K	D	T	L	R	E	V	R	M	A	L	L	E	A	D	V	A	L	P	V	V	R	E	F	I	N	R	V	K	E	K	A	V	G	H	E	V	N	K	S	L	T	P	G	Q	E	F	V	K	I	.	.	V	R	N	E	L	V	A
Query Conservation																																																																									.	.
Alig confidence																	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.																														.	.
Template Conservation																	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	A	A	Q	T	A	L	A	G	L	Q	G	K	L	A	.	.	.	.	.	.	.	H	P	I	R	Q	L	R	A	N	C	.	.	.	.	.	.	.	.	.	.	L	D	I	L	A	E	I	E	A	R	I	D	F	E	E	D	L	P	P	L	D	D	E	A	I	I	S	D	I	E	N	I	A	A	E	I	S	Q
Template Known Secondary structure													T	T	T		.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.											T	T	S	S	S	S	S					T	T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.								160	.	.	.	.	.	.	.	.	.											170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	G	E	E	N	Q	T	L	N	L	A	A	Q	P	P	A	V	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	F	F	P	S	D	V
Query Conservation
Alig confidence																.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	A	T	K	D	K	G	E	L	L	R	T	G	.	.	L	K	V	A	I	V	G	R	P	N	V	G	K	S	S	L	L	N	A	W	S	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	A	I	V	T	D	L	P	G	T	T
Template Known Secondary structure			T	T	T											.	.									T	T	S	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B	S			S			T	T
Template Predicted Secondary structure																.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.																														.	.	.	.	.	250	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	K	P	V	D	I	V	N	A	A	L	K	E	A	K	L	K	F	Y	D	V	L	L	V	D	T	A	G	R	L	H	V	D	E	A	M	M	D	E	I	K	Q	V	H	A	S	I	N	P	V	E	T	L	F	V	V	D	A	M	T	G	Q	D	A	A	N	T	A	K	A	F	N	E	A	L	P	L	T	G
Query Conservation
Alig confidence											.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	D	V	V	E	S	Q	L	V	.	.	.	.	.	.	.	V	G	G	I	P	V	Q	V	L	D	Q	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	A	D	L	V	L	L	T	I	D	A	A	T	G	W	T	T	G	D	Q	E	I	Y	E	Q	V	K	H	R	P	L	I
Template Known Secondary structure											.	.	.	.	.	.	.		T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S		S								T	T	T		S												T	T	S
Template Predicted Secondary structure											.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.								.	.	.	.	270	.	.	.	.	.	.	.	.																			.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		V	V	L	T	K	V	D	G	D	A	R	G	G	A	A	L	S	I	R	H	I	T	G	K	P	I	K	F	L	G	.	.	V	G	E	K	T	E	A	L
Query Conservation																																.	.
Alig confidence																																.	.
Template Conservation
Template Sequence		L	V	M	N	K	I	D	L	V	E	K	Q	L	I	T	S	L	E	Y	P	E	N	I	T	Q	I	V	H	T	A	A	A	Q	K	Q	G	I	D	S	L
Template Known Secondary structure							T	T	S	S		G	G	G	S	T	T					T	T								B	T	T	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions