Job Description P0AGD7 Confidence 96.47% Date Thu Jan 5 11:28:50 GMT 2012 Rank 341 Aligned Residues 128 % Identity 16% Template c3degC_ PDB info PDB header:ribosome Chain: C: PDB Molecule:gtp-binding protein lepa; PDBTitle: complex of elongating escherichia coli 70s ribosome and ef4(lepa)-2 gmppnp Resolution NULL Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	F	F	P	S	D	V	G	Q	K	P	V	D	I	V	N	A	A	L	K	E	A	K
Query Conservation
Alig confidence																																										.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	N	F	S	I	I	A	H	I	D	H	G	K	S	T	L	S	D	R	I	I	Q	I	C	G	G	L	S	D	R	E	M	E	A	Q	V	L	D	S	M	.	.	.	D	L	E	R	E	R	G	I	T	I	K	A	Q	S	V	T	L	D	Y	K	A	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S	S	S	S	S	S										S	S			S	S				S	S	S			S	S	S	.	.	.							T	S		S	S											T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.
Predicted Secondary structure																																																.																				.
Query SS confidence																																																.																				.
Query Sequence		L	K	F	Y	D	V	L	L	V	D	T	A	G	R	L	H	V	D	E	A	M	M	D	E	I	K	Q	V	H	A	S	I	N	P	V	E	T	L	F	V	V	D	A	M	T	G	.	Q	D	A	A	N	T	A	K	A	F	N	E	A	L	P	L	T	G	V	.	V	L	T	K	V	D
Query Conservation																																																.																				.
Alig confidence																											.	.	.	.	.	.																.																				.
Template Conservation																											.	.	.	.	.	.
Template Sequence		G	E	T	Y	Q	L	N	F	I	D	T	P	G	H	V	D	F	S	Y	E	V	S	R	S	L	.	.	.	.	.	.	A	A	C	E	G	A	L	L	V	V	D	A	G	Q	G	V	E	A	Q	T	L	A	N	C	Y	T	A	M	E	M	D	L	E	V	V	P	V	L	N	K	I	D
Template Known Secondary structure		S														S	T	T									.	.	.	.	.	.	T	T		S								T	T	T				T												T	T										T	T
Template Predicted Secondary structure																											.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.							.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions