Job Description P0AGD7 Confidence 96.83% Date Thu Jan 5 11:28:50 GMT 2012 Rank 288 Aligned Residues 84 % Identity 23% Template c3crqA_ PDB info PDB header:transferase Chain: A: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: structure of trna dimethylallyltransferase: rna2 modification through a channel Resolution 2.20 Å

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		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.												140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		P	A	V	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	.	.	.	.	.	.	.	.	.	.	.	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G	.	V	D	F	F	P	S	D	V	G	Q	K
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.																		.
Alig confidence																											.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																											.	.	.	.	.	.
Template Sequence		P	P	A	I	F	L	M	G	P	T	A	A	G	K	T	D	L	A	M	A	L	A	D	A	L	.	.	.	.	.	.	P	C	E	L	I	S	V	D	S	A	L	I	Y	R	G	M	D	I	G	T	A	K	P	S	R	E	L	L	A	R	Y	P	H	R	L	I	D	I	R	D	P	A	E	S	Y	S	A	A	E
Template Known Secondary structure										S	T	T	S	S										T	T	S	.	.	.	.	.	.									T	T	T	T	B	T	T			T	T	T	T										S				S	S	S		B		T	T	S
Template Predicted Secondary structure																											.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.							30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	D	I	V	N	A	A	L	K	E	A	K	L	K	F	Y	D	V	L	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	R	A	D	A	L	A	A	M	A	K	A	T	A	R	G	R	I	P	L	L	V
Template Known Secondary structure																T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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