Job Description P0AGD7 Confidence 96.70% Date Thu Jan 5 11:28:50 GMT 2012 Rank 300 Aligned Residues 116 % Identity 16% Template c2z0hA_ PDB info PDB header:transferase Chain: A: PDB Molecule:thymidylate kinase; PDBTitle: crystal structure of thymidylate kinase in complex with dtdp2 and adp from thermotoga maritima Resolution 2.10 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	F	F	P	S	D	V	G	Q	K	P	V	D	I	V	N	A	A	L	K	E	A	K	L
Query Conservation
Alig confidence																												.																.	.														.	.	.	.
Template Conservation																												.																.	.														.	.	.	.
Template Sequence		F	I	T	F	E	G	I	D	G	S	G	K	S	T	Q	I	Q	L	L	A	Q	Y	L	E	K	R	.	G	K	V	I	L	K	R	E	P	G	G	T	E	T	G	.	.	E	K	I	R	K	I	L	L	E	E	E	V	T	.	.	.	.	P	K	A	E	L	F	L	F	L	A	S	R	N	L	L	V	T	E	I
Template Known Secondary structure								S	T	T	S	S																.								S	S		S	S				.	.										S				.	.	.	.
Template Predicted Secondary structure																												.																.	.														.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.										.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.
Query Sequence		K	F	Y	D	V	L	L	V	D	T	A	G	R	L	H	.	.	.	.	.	.	.	.	.	V	D	E	A	M	M	D	E	I	K	Q	V	H	A	S	I	N	P	V	E	T	L	F	V	V	D	A	M
Query Conservation																	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	Q	Y	Y	A	V	L	L	D	R	Y	T	D	S	S	V	A	Y	Q	G	F	G	R	N	L	G	K	E	I	V	E	E	L	N	D	F	A	T	D	G	L	I	P	D	L	T	F	Y	I	D	V	D
Template Known Secondary structure		T	T								S									T	T	T	T	T		S														T	T				S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions