Job Description P0AGD7 Confidence 97.79% Date Thu Jan 5 11:28:50 GMT 2012 Rank 115 Aligned Residues 128 % Identity 23% Template c2w58B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:primosome component (helicase loader); PDBTitle: crystal structure of the dnai Resolution 2.50 Å

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		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	Q	P	P	A	V	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	F	F	P	S	D	V	G	Q	K	P	V	D	I	V	N	A	A
Query Conservation
Alig confidence																																.											.	.	.	.	.	.	.	.	.	.	.												.	.	.	.												.	.
Template Conservation																																.											.	.	.	.	.	.	.	.	.	.	.												.	.	.	.												.	.
Template Sequence		P	G	K	K	M	K	G	L	Y	L	H	G	S	F	G	V	G	K	T	Y	L	L	A	A	I	A	N	E	L	A	.	K	R	N	V	S	S	L	I	V	Y	.	.	.	.	.	.	.	.	.	.	.	V	P	E	L	F	R	E	L	K	H	S	.	.	.	.	L	Q	D	Q	T	M	N	E	K	L	D	.	.
Template Known Secondary structure		T	T											S	S	S	S	S														.		S	S								.	.	.	.	.	.	.	.	.	.	.									T	T	T	.	.	.	.		S	S	S	T							.	.
Template Predicted Secondary structure																																.											.	.	.	.	.	.	.	.	.	.	.												.	.	.	.												.	.
Template SS confidence
		1157	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.		.	.	.	1190	.	.	.	.	.	.												.	.	.	1200	.	.	.	.	.	.	.					.	.	1210	.	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	E	A	K	L	K	F	Y	D	V	L	L	V	D	T	A	G	R	L	H	V	D	E	A	M	M	D	E	I	K	Q	V	H	A	S	I	N	P	V	E	T	L	F	V	V	D	A	M	T	G	Q	D	A	A	N	T	A	K	A	F	N	E	A	L	P	L	T	G	V	V	L	T	K	V	D	G	D	A	R
Query Conservation
Alig confidence		.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	Y	I	K	K	V	P	V	L	M	L	D	D	L	G	A	E	A	S	S	W	V	R	D	D	V	F	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.						S	S								S	S									T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						1219	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.									.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.
Query Sequence		G	G	A	A	L	S	I	R	H	I	T	G	K	P	I	K	F	L	G	V	G	E	K	T	E	A	L	E	P	F	H	.	.	.	.	.	.	.	.	P	D	R	I	A	S	R	I	L	G	M
Query Conservation																																	.	.	.	.	.	.	.	.
Alig confidence		.	.	.															.														.	.	.	.	.	.	.	.
Template Conservation		.	.	.															.
Template Sequence		.	.	.	I	L	Q	Y	R	M	F	E	N	L	P	T	F	F	.	T	S	N	F	D	M	Q	Q	L	A	H	H	L	T	Y	E	E	E	K	V	K	A	A	R	I	M	E	R	I	R	Y	L
Template Known Secondary structure		.	.	.								T	T						.			S	S										T
Template Predicted Secondary structure		.	.	.															.
Template SS confidence
					1248	.	1250	.	.	.	.	.	.	.	.	.	1260	.		.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions