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Job DescriptionP0AGD7
Confidence98.98%DateThu Jan 5 11:28:50 GMT 2012
Rank40Aligned Residues157
% Identity20%Templatec2vedA_
PDB info PDB header:transferaseChain: A: PDB Molecule:membrane protein capa1, protein tyrosine kinase; PDBTitle: crystal structure of the chimerical mutant capabk55m2 protein
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   93......100......... 110.........120.........130.........140.........150.....
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Query Sequence  LNLAAQPPAVVLMAGLQ. GAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQV. . . . . . . . . . . . . . . .
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Template Sequence  FANPDSAVQSIVITSEAPGAGMSTIAANLAVAYAQA. GYKTLIVDGDMRKPTQHYIFNLPNNEGLSSLLLNWSTYQDSII
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   1034.....1040.........1050.........1060......... 1070.........1080.........1090.........1100.........1110..
 
   156...160.........170... ......180.........190.........200.........210.........220....
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Query Sequence  . . . . . GVDFFPSDVGQKPVDIVN. . . . . AALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAM.
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Template Sequence  STEIEDLDVLTSGPIPPNPSELITSRAFANLYDTLLMNYNFVIIDTPPVNTVTDAQLFSKFT. . . . . . . GNVVYVVNSEN
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   1113......1120.........1130.........1140.........1150.........1160.........1170.... .....1180.....
 
   225....230.........240. ........250.......
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Query Sequence  TGQDAANTAKAFNEALP. . LTGVVLTKVDGDARGG
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Template Sequence  NNKDEVKKGKELIEATGAKLLGVVLNRMPKDKSAS
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   1186...1190.........1200.........1210.........1220
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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