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Job DescriptionP0AGD7
Confidence97.40%DateThu Jan 5 11:28:50 GMT 2012
Rank193Aligned Residues122
% Identity13%Templatec2vbcA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:dengue 4 ns3 full-length protein; PDBTitle: crystal structure of the ns3 protease-helicase from dengue2 virus
Resolution3.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   98.100.........110.........120.........130.........140.........150.........160.......
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Query Sequence  QPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQK. . . . . . . . . .
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Template Sequence  RKKRLTIMDLHPGAGKTKRILPSIVREALKRRLRTLILAP. . . TRVVAAEMEEALRGLPIRYQTPAVKSDHTGREIVDLM
Template Known Secondary structure  STT



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   184.....190.........200.........210.........220... ......230.........240.........250.........260
 
   168.170.........180.........190.........200.........210... ......220....
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Query Sequence  . PVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASIN. PVETLFVVDAM
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Template Sequence  CHATFTTRLLSSTRVPNYNLIVMDEA. . HFTDPCSVAARGYISTRVEMGEAAAIFMTAT
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   261........270.........280...... ...290.........300.........310.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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