Job Description P0AGD7 Confidence 97.15% Date Thu Jan 5 11:28:50 GMT 2012 Rank 235 Aligned Residues 112 % Identity 13% Template c2qq0B_ PDB info PDB header:transferase Chain: B: PDB Molecule:thymidine kinase; PDBTitle: thymidine kinase from thermotoga maritima in complex with2 thymidine + appnhp Resolution 1.50 Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	F	F	P	S	D	V	G	Q	K	P	V	D	I	V	N	A	A	L	K	E	A	K
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Sequence		K	L	T	V	I	T	G	P	M	Y	S	G	K	T	T	E	L	L	S	F	V	E	I	Y	K	L	G	K	K	K	V	A	V	F	K	P	K	S	T	M	I	V	S	.	.	.	.	.	.	.	.	.	.	.	.	H	V	E	A	H	V	I	E	R	P	E	E	M	R	K	Y	I	E	.	.	.	.	.	.	.
Template Known Secondary structure									S	T	T	S	S															T	T												B				.	.	.	.	.	.	.	.	.	.	.	.			B					S	S	G	G	G	G	G	G	G			.	.	.	.	.	.	.
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.													.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	F	Y	D	V	L	L	V	D	T	A	G	R	L	H	V	D	E	A	M	M	D	E	I	K	Q	V	H	A	S	I	N	P	V	E	T	L	F	V	V	D	A	M	T	G	Q	D	A	A	N	T	A	K	A
Query Conservation
Alig confidence		.															.	.															.
Template Conservation		.															.	.															.
Template Sequence		.	E	D	T	R	G	V	F	I	D	E	V	Q	F	F	.	.	N	P	S	L	F	E	V	V	K	D	L	L	D	R	.	G	I	D	V	F	C	A	G	L	D	L	T	H	K	Q	N	P	F	E	T	T	A	L
Template Known Secondary structure		.	T	T									G	G	G	S	.	.		T	T											T	.	T									S	B		T	T	S		B
Template Predicted Secondary structure		.															.	.															.
Template SS confidence
			75	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions