Job Description P0AGD7 Confidence 97.22% Date Thu Jan 5 11:28:50 GMT 2012 Rank 220 Aligned Residues 187 % Identity 21% Template c2qptA_ PDB info PDB header:endocytosis Chain: A: PDB Molecule:eh domain-containing protein-2; PDBTitle: crystal structure of an ehd atpase involved in membrane remodelling Resolution 3.10 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.																	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	F	F	P	S	D	V	G
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	V	L	V	A	G	Q	Y	S	T	G	K	T	S	F	I	Q	Y	L	L	E	Q	E	V	P	G	S	R	V	G	P	E	P	T	T	D	C	F	V	A	V	M	H	G	E	T	E	G	T	V	P	G	N	T	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	R	F	M	C	A
Template Known Secondary structure								B	T	T	S											T	S			S	S					S	S					S								S	S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.																			.	.	.	.	.	120	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.				.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																																															.	.	.
Query SS confidence																																																															.	.	.
Query Sequence		Q	K	P	V	D	I	V	N	A	A	L	K	E	A	K	L	K	F	Y	D	V	L	L	V	D	T	A	G	R	L	H	V	D	E	A	M	M	D	E	I	K	Q	V	H	A	S	I	N	P	V	E	T	L	F	V	V	D	A	M	T	G	.	.	.	Q	D	A	A	N	T	A	K	A	F	N	E	A	L	P	L
Query Conservation																																																															.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.																												.	.													.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Sequence		Q	L	P	N	Q	V	L	E	S	.	.	.	.	.	.	.	.	.	.	.	I	S	I	I	D	T	P	G	I	L	S	R	G	Y	D	F	P	A	V	L	R	W	F	A	E	R	V	.	.	D	L	I	I	L	L	F	D	A	H	K	L	E	I	S	D	E	F	S	E	A	I	G	A	L	R	G	H	E	D	K
Template Known Secondary structure											.	.	.	.	.	.	.	.	.	.	.									B					S														.	.	S								T	T	S														T	T	T		G	G	G
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.																												.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.												.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.											.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	V	V	L	T	K	V	D	G	D	A	R	G	G	.	.	.	.	.	.	.	.	.	.	A	A	L	S	I	R	H	I	T	G	K	P	I	K	F	L	G	V	G	E	K	T	E	A	L	E	P	F	H	P	D	R	I	A	S	R	I	L	G	M	G	D	V	L	S	L	I	E	D	I	E	S	K	V	D
Query Conservation																	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.
Template Sequence		I	R	V	V	L	N	K	A	D	M	V	E	T	Q	Q	L	M	R	V	Y	G	A	L	M	W	A	L	G	K	V	V	G	T	P	E	V	L	R	V	Y	I	G	S	F	W	S	Q	P	L	L	V	P	D	N	R	R	L	F	E	L	E	.	.	.	.	.	.	E	Q	D	L	F	R	D	I	Q	G	L	P	R
Template Known Secondary structure									G	G	G	S																							S	S							S			S	S	S			S	S		T	T								.	.	.	.	.	.										T	T	G	G
Template Predicted Secondary structure																																																															.	.	.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.							.	.	.	.	.	280	.	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	Q	A	E	K	L	A	S	K	L	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	A	A	L	R	K	L	N	D	L	V	K	R
Template Known Secondary structure		G
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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