Job Description P0AGD7 Confidence 98.55% Date Thu Jan 5 11:28:50 GMT 2012 Rank 56 Aligned Residues 173 % Identity 19% Template c2qmoA_ PDB info PDB header:ligase Chain: A: PDB Molecule:dethiobiotin synthetase; PDBTitle: crystal structure of dethiobiotin synthetase (biod) from helicobacter2 pylori Resolution 1.47 Å

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		101	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.								140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.								.	160	.	.	.	.	.
Predicted Secondary structure										.																																.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Query SS confidence										.																																.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Query Sequence		A	V	V	L	M	A	G	L	.	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	.	.	.	.	.	.	.	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	.	.	.	.	.	.	.	F	F	P	S	D	V	G
Query Conservation										.																																.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Alig confidence										.																		.														.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation																												.
Template Sequence		H	X	L	F	I	S	A	T	N	T	N	A	G	K	T	T	C	A	R	L	L	A	Q	Y	C	N	.	A	C	G	V	K	T	I	L	L	K	P	I	E	T	G	V	N	D	A	I	N	H	S	S	D	A	H	L	F	L	Q	D	N	R	L	L	D	R	S	L	T	L	K	D	I	S	F	Y	R	Y	H	K	V
Template Known Secondary structure									S	S	T	T	S															.		T	T												S			T	T	T				S										T	T	T		T	T												S	S
Template Predicted Secondary structure																												.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		166	.	.															.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.								.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Query Sequence		Q	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	I	V	N	A	A	L	K	E	A	K	L	K	F	Y	D	V	L	L	V	D	T	A	G	.	.	.	.	.	.	.	R	L	H	V	D	E	A	M	M	D	E	I	K	Q	V	H	A	S	I	N	P	V	E	T	L	F	V	V	D	A	M
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.													.													.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation																															.																																	.	.	.	.	.	.	.	.
Template Sequence		S	A	P	L	I	A	Q	Q	E	E	D	P	N	A	P	I	D	T	D	N	L	T	Q	R	L	H	N	F	T	.	K	T	Y	D	L	V	I	V	E	G	A	G	G	L	C	V	P	I	T	L	E	E	N	X	L	D	F	A	L	K	L	K	.	.	.	.	.	.	.	.	A	K	X	L	L	I	S	H	D	N
Template Known Secondary structure		S											T	T															G	G	.	G	T		S							S	S		T	T		B	S	S	S	S		B									T	.	.	.	.	.	.	.	.										S
Template Predicted Secondary structure																															.																																	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.									140	.	.	.	.	.	.	.	.	.
		225	.			.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.					.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure				.	.														.																				.	.	.	.
Query SS confidence				.	.														.																				.	.	.	.
Query Sequence		T	G	.	.	Q	D	A	A	N	T	A	K	A	F	N	E	A	.	L	P	L	T	G	V	V	L	T	K	V	D	G	D	A	R	G	G	A	.	.	.	.	A	L	S	I	R	H	I	T	G	K	P	I	K	F	L	G	V	G	E	K	T	E	A	L	E	P	F
Query Conservation				.	.														.																				.	.	.	.
Alig confidence				.	.														.																				.	.	.	.													.	.
Template Conservation																																																							.	.
Template Sequence		L	G	L	I	N	D	C	L	L	N	D	F	L	L	K	S	H	Q	L	D	Y	K	I	A	I	N	L	K	G	N	N	T	A	F	H	S	I	S	L	P	Y	I	E	L	F	N	T	R	S	N	N	P	I	.	.	V	I	F	Q	Q	S	L	K	V	L	X	S	F
Template Known Secondary structure		T	T														T	S	S	S										T	T		S	S					T												S	S			.	.			G	G	G
Template Predicted Secondary structure																																																							.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions